Pairwise Alignments

Query, 471 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase from Caulobacter crescentus NA1000

Subject, 464 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  349 bits (896), Expect = e-100
 Identities = 210/467 (44%), Positives = 282/467 (60%), Gaps = 16/467 (3%)

Query: 1   MIPVRGFEDKTVAVFGLGRTGLTAARALIAGGAKVALWDEKPASREAAAAEGFAVVDLQA 60
           MIPVRGF  +T+AV GLGR+GL  ARAL AGGA    WD+   +R  A AEGFA   L+ 
Sbjct: 1   MIPVRGFSGETIAVLGLGRSGLATARALRAGGATPLCWDDNTEARARAEAEGFACAPLKH 60

Query: 61  AD-WSQFAALMLSPGVPLSHPKPHWTVEKARAAGVEVLGDVELFARTVNAAPAHKR---- 115
           AD +   AAL+ SPG+P  +P P+ T+  A + G+ V  D+ LF R+  A P        
Sbjct: 61  ADAFDGVAALITSPGIPHLYPTPNPTIALAMSLGIPVDNDIGLFFRSF-ATPDWDEFDSL 119

Query: 116 PKIIAITGTNGKSTTTALIGHLCASAGRDTRVGGNIGLGVLGLEDMHGGAVYVLELSSYQ 175
           P++IA+TG+NGKSTT+ALI H+  +AGR T++ GNIG GVL ++    G + VLELSSYQ
Sbjct: 120 PRVIAVTGSNGKSTTSALIHHVLTAAGRPTQLAGNIGRGVLDIDPGEDGGIVVLELSSYQ 179

Query: 176 LDLTSSLKPDAVVLLNISPDHLDRHGGMDGYIAAKRRIFLNQGKGDTAIIGVDDAWCQQI 235
            +L  +L PD  V  N+SPDHLDRHGGM GY AAKRR+F   G  D A+IG D+     +
Sbjct: 180 TELARALTPDIAVFTNLSPDHLDRHGGMGGYFAAKRRLF-TIGGPDRAVIGTDEPEGLFL 238

Query: 236 CTEITA--ANRRTIWPISAGKAMGRG--VYALQGVLYDATGERVVEVADILRARSLPGRH 291
            ++++   A+ R I  +++ K  G G  V A +G L +    R     D+     LPG H
Sbjct: 239 ASQLSVAPADDRVI-RVTSAKPSGPGWVVSARKGFLAEHRKGRQTGSIDLRPIPGLPGAH 297

Query: 292 NWQNAAAAYAAARAIGISMQDAVDGLMTFPGLAHRMETVGKIGKVRFVNDSKATNADAAR 351
           N QNAA AYAA R++G++ +    G  +F GL HR + VG    V FVNDSKATN D+A 
Sbjct: 298 NHQNAACAYAACRSLGLAPRQIEAGFASFKGLPHRSQIVGTANGVTFVNDSKATNVDSAA 357

Query: 352 QAMSSYPKFYWIAGGVAKAGGIDDLKDLFPRIAKAYLIGEAAEPFSWTLAGKAECVLSGT 411
           +A+ ++ +  WIAGG+ K GG+  L      + KAYLIG +A  F+  +      V   T
Sbjct: 358 KALQAFDRIRWIAGGLEKEGGLAALTPHLGGVRKAYLIGRSAAEFALGIPDTPHEVCE-T 416

Query: 412 LEKAVQQAYADAAASGEEAIVLLSPACASFDQFSDFEARGEAFRAAV 458
           + +AV  A A+A        +LL+PA ASFDQ+ +FE RGE F A V
Sbjct: 417 MARAVAAAVAEAEPGD---TILLAPAAASFDQYDNFERRGEDFIAEV 460