Pairwise Alignments

Query, 471 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase from Caulobacter crescentus NA1000

Subject, 439 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase (RefSeq) from Shewanella sp. ANA-3

 Score =  207 bits (526), Expect = 7e-58
 Identities = 164/458 (35%), Positives = 224/458 (48%), Gaps = 40/458 (8%)

Query: 14  VFGLGRTGLTAARALIAGGAKVALWDEKPASREA-AAAEGFAVVDLQAADWS-----QFA 67
           V GLG TGL+  R L   G    + D +     A   A  F  V L A  +      Q  
Sbjct: 9   VLGLGATGLSVVRYLCGKGITPLVMDSRRQPPGADTLASAFPEVQLIAGGFDCRYLVQAT 68

Query: 68  ALMLSPGVPLSHPKPHWTVEKARAAGVEVLGDVELFARTVNAAPAHKRPKIIAITGTNGK 127
            +++SPG+ +  P+    V  A   G+EV+GDVELFAR +    A ++P +I ITG+NGK
Sbjct: 69  QIIISPGIAIDTPE----VRAALDMGIEVIGDVELFAREI----ADRKPCVIGITGSNGK 120

Query: 128 STTTALIGHLCASAGRDTRVGGNIGLGVLGLEDMHGGAVYVLELSSYQLDLTSSLKPDAV 187
           ST T L+G +   AG    VGGNIG+  L L   +   ++VLELSS+QL+ T SL   A 
Sbjct: 121 STVTTLVGEMLREAGMAVAVGGNIGIPALDLLTENAD-IFVLELSSFQLETTHSLNCVAS 179

Query: 188 VLLNISPDHLDRHGGMDGYIAAKRRIFLNQGKGDTAIIGVDDAWCQQICTEITAANRRTI 247
             LN++ DH+DR+  MD Y  AK R++    +  + I   DDA    I TE    N   +
Sbjct: 180 TCLNVTEDHMDRYSDMDAYRKAKLRLY---HQSRSIIFNRDDALT--IPTEPMNQNSFGL 234

Query: 248 WPISAGKAMGRGVYALQGVLYDATGERVVEVADILRARSLPGRHNWQNAAAAYAAARAIG 307
            P   G   G         +Y    E ++ + ++    SL G HN  N  AA A   A+G
Sbjct: 235 AP-PEGDEWG----ICDSKIYHGHSE-IMPITEV----SLIGSHNHANLLAAMALVYAVG 284

Query: 308 ISMQDAVDGLMTFPGLAHRMETVGKIGKVRFVNDSKATNADAARQAMSSYP----KFYWI 363
           +  Q       TF GL+HR E VG    V +VNDSKATN  A   A+            I
Sbjct: 285 VEKQVMAKVARTFTGLSHRCEVVGVKAGVTYVNDSKATNVGATVAALDGLSDHLGDIILI 344

Query: 364 AGGVAKAGGIDDLKDLFPRIAKAYLIGEAAEPFSWTLAGKAECVLSGTLEKAVQQAYADA 423
           AGG  K      L +   ++     +G      +   A K   +   ++  AV +A A+ 
Sbjct: 345 AGGDGKGADFSPLVEPLTKVTHLITLGRDGNKIA---ALKEGAIKVDSMAAAVAKA-AEL 400

Query: 424 AASGEEAIVLLSPACASFDQFSDFEARGEAFRAAVNGL 461
           A SG+  IVLLSPACAS D +S+F ARG+ FR+ V  L
Sbjct: 401 ATSGD--IVLLSPACASLDMYSNFMARGDDFRSQVEQL 436