Pairwise Alignments

Query, 786 a.a., membrane-bound glycosyl hydrolase from Caulobacter crescentus NA1000

Subject, 668 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 85.5 bits (210), Expect = 9e-21
 Identities = 95/398 (23%), Positives = 163/398 (40%), Gaps = 46/398 (11%)

Query: 215 LDVALGLAGYLATILEGLNDDQVQAILVAEHGGLCEAYAETYALTGDPRWLNIA------ 268
           LD+A+    Y   +   + +   Q   V  H     A  + Y  TGD ++L+ A      
Sbjct: 185 LDIAIK---YADCVCREIGNGPQQKKYVPGHQIAEMALVKLYMATGDKKYLDQAKFFLDT 241

Query: 269 -----RRLRHRELVDPLAQGRDELAGLHANTQIPKIIGLARLYEVAGDPAEARTARFFHQ 323
                R+  + +   P+ + +DE  G HA   +    G+A +  + GD +  +       
Sbjct: 242 RGYTSRKDTYSQAHKPVVE-QDEAVG-HAVRAVYMYSGMADVAAITGDSSYIKAIDKIWD 299

Query: 324 TVTRRHSYAIGGNSDREHFGPPDAIATRLSETT--CEACNSYNMLKLTRRLWSWAPDGAL 381
            +  +  Y  GG     H G        L   +  CE C +   + +  RL+    D   
Sbjct: 300 NIVSKKIYITGGIG-AHHAGEAFGNNYELPNLSAYCETCAAIGNVYMNYRLFLLHGDAKY 358

Query: 382 FDDYERAQLNHIMAHQRPSDGMFVYFMPMAAGGRRSYSTPEDSFWCCVGSGMESHAKHAD 441
           FD  ER   N +++      G F Y  P+++ G+ S   P     CC  +          
Sbjct: 359 FDVLERTLYNGLISGVSLDGGSFFYPNPLSSNGKYS-RKPWFGCACCPSNVSRFIPSLPG 417

Query: 442 SIWWRGGQTLYLNLFIASRLDLPGD--DFAIDLDTAFPQSGQVDLTVTRAPRGLREIALR 499
            ++      +Y+NL+++++ +L  D     ++ +T +P +G + L +T+  +    + LR
Sbjct: 418 YVYAVKNDQVYVNLYLSNKAELKVDKKKILLEQETGYPWNGDIRLKITQGNQDF-TMKLR 476

Query: 500 LPAWC-----------------AAPRLSVNGAPTPIQTRGDGYARLSRRWKAGDRVTL-- 540
           +P W                   A ++SVNG  T      DGY  ++R+WK GD V +  
Sbjct: 477 IPGWVRGNVLPGDLYSYADNQKPAYQVSVNG-QTVESDVNDGYLSIARKWKKGDVVEVHF 535

Query: 541 -MLPMAVRAEPTPD-DPNLVAFLSGPLVLAADLGPDER 576
            M+P  V+A P  + D   VA   GP+V  A+  PD R
Sbjct: 536 DMIPRIVKANPKVEADHGRVAVERGPIVYCAE-WPDNR 572