Pairwise Alignments

Query, 786 a.a., membrane-bound glycosyl hydrolase from Caulobacter crescentus NA1000

Subject, 698 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 85.5 bits (210), Expect = 9e-21
 Identities = 115/511 (22%), Positives = 191/511 (37%), Gaps = 68/511 (13%)

Query: 113 YLSACALQVANDGDPVLSQRLAYTVAQLARVQAAHGDGYV--------------GGTTRW 158
           ++   A   A + DP L + +   +A + + Q A  DGY+                T   
Sbjct: 106 WMEGVASVYAVNKDPELDKLMDNFIACVVKAQRA--DGYIHTPVVIEELNKGIDSHTLAD 163

Query: 159 GQADPVGGKAVFEELRRGDIRANRFSLNDGWVPIYTWHKIHAGLLDAHRLAATPGALDVA 218
            Q   V G  V  E  +G   ANR +           H + AG++  HR        D A
Sbjct: 164 SQQQTVIGTKVGSEDEKGAF-ANRLNFET----YNLGHLMMAGIVH-HRATGKTTLFDAA 217

Query: 219 LGLAGYLATILEGLNDDQVQAILVAEHGGLCEAYAETYALTGDPRWLNIARRLRH-RELV 277
           +    +L    E  + +  +  +   H        E Y  TG+PR+L +++ L   R +V
Sbjct: 218 VKATDFLCHFYETASAELARNAICPSH---YMGVVEMYRATGNPRYLELSKNLIDIRGMV 274

Query: 278 DPLAQG-------RDELAGL-HANTQIPKIIGLARLYEVAGDPAEARTARFFHQTVTRRH 329
           +            RD+   + HA        G+A +Y   G+    +        +  R 
Sbjct: 275 ESGTDDNQDRIPFRDQYRAMGHAVRANYLYAGVADVYAETGEQQLMKNLTSIWNDIVTRK 334

Query: 330 SYAIG-------GNSDREHFGPPDAIAT---------RLSETTC--EACNSYNMLKLTRR 371
            Y  G       G S       PD+I           +L  +T   E C +   +    R
Sbjct: 335 MYVTGACGALYDGTSPDGTCYEPDSIQKVHQSYGRPYQLPNSTAHNETCANIGNMLFNWR 394

Query: 372 LWSWAPDGALFDDYERAQLNHIMAHQRPSDGMFVYFMPMAAGGRRSYS-------TPEDS 424
           +     D    +  E    N +++        + Y  P+       Y+       T   S
Sbjct: 395 MLEVTGDAKYAELVETCLYNSVLSGISLDGKKYFYTNPLRISADLPYTLRWPKERTEYIS 454

Query: 425 FWCCVGSGMESHAKHADSIWWRGGQTLYLNLFIASRLDLPGDD---FAIDLDTAFPQSGQ 481
            +CC  + + +  +  +  +    + +Y NL+ A+ L     D    A+  +T +P  G 
Sbjct: 455 CFCCPPNTLRTLCQAQNYAYTLSPEGIYCNLYGANTLTTNWKDKGELALVQETDYPWEGN 514

Query: 482 VDLTVTRAPR--GLREIALRLPAWCAAPRLSVNGAPTPIQTRGDGYARLSRRWKAGDRVT 539
           V +T+ + PR  G   +  R+P WC    L+VNG P  +  + + YA ++R WK GD V 
Sbjct: 515 VRVTLNKVPRKAGAFSLFFRIPEWCGKAALTVNGQPVSMNAKANTYAEVNRTWKKGDVVE 574

Query: 540 LMLPMAV---RAEPTPDD-PNLVAFLSGPLV 566
           L++ M V    A P  ++  N V    GPLV
Sbjct: 575 LVMDMPVCLLEAHPLAEEIRNQVVVKRGPLV 605