Pairwise Alignments

Query, 312 a.a., membrane transport protein from Caulobacter crescentus NA1000

Subject, 302 a.a., Predicted permeases from Pseudomonas stutzeri RCH2

 Score =  107 bits (266), Expect = 5e-28
 Identities = 96/299 (32%), Positives = 132/299 (44%), Gaps = 7/299 (2%)

Query: 10  VWPFFLLVAAGVALSRLRLLDARMTQGLSAYVYWVGFPALLIHSLSRLGRPGPELWSGLA 69
           +WP F L+ AG  L            G     Y+V FPALL  SL+      P L   LA
Sbjct: 8   LWPLFALIVAGYCLRLRAFPSVEFWPGAERINYFVLFPALLFSSLATAPLDNPAL-PQLA 66

Query: 70  AYAAVGLAV-MASLVVGGRALGWSRPERAGAAMAAGVGNSAFLAVPVTAAVLGAETARLV 128
           A   +GL +   +L++  R  GW    R GA     +  + +L +    ++ G E   L 
Sbjct: 67  AAVMLGLGLPWIALLLMKRLRGWP-AGRFGAITQGVLRFNTYLGLAAVGSLFGKEGLALA 125

Query: 129 AGAIAADFVVLAAAGVGLLGWAAGRSVWRAMAQAFQNPVVIAALLGLLLALLNLALPQPL 188
           A  +A     +    V  L    G SV   +    +NP+++A + G L+ L  L LP   
Sbjct: 126 ALMLALMVPTVNVMSVWALTAERGLSVRGLLLPIAKNPLILACVAGALVNLSGLGLPGGT 185

Query: 189 DRAVGLAAASGSPVGLVALGAALGLPQTEDEPGPRAGPVVLAALAKLLAFPLLVWLAIGL 248
           DR + L AA+  P+GL+ +GAAL  PQ   E G     +     A+LLA PLL +    +
Sbjct: 186 DRLLSLLAAASLPLGLLCVGAAL-KPQ---ELGGEIPALGWNCAARLLAVPLLAYGVARV 241

Query: 249 TPAPAEFRTGATLVAAAPTAVNVFIQTRAYGVWPRGAARIVALTTALAIVSLSLVAILL 307
              P    T   L  A PTA   ++ TR  G      A I+ L T LA  SL LV  LL
Sbjct: 242 LGLPPMETTILVLFFALPTAPTAYVLTRQLGGDSHLMAGIITLQTLLAAASLPLVLTLL 300