Pairwise Alignments

Query, 312 a.a., membrane transport protein from Caulobacter crescentus NA1000

Subject, 330 a.a., AEC family transporter from Vibrio cholerae E7946 ATCC 55056

 Score = 71.2 bits (173), Expect = 3e-17
 Identities = 75/306 (24%), Positives = 127/306 (41%), Gaps = 16/306 (5%)

Query: 12  PFFLLVAAGVALSRLRLLDARMTQGLSAYVYWVGFPALLIHSLSRLGRPGPELWSGLAAY 71
           P  L++  GV   R+ L++    +  S  V+ V  PA+L  S+           S L  Y
Sbjct: 29  PICLMLGLGVLFKRINLINENFIEVASRIVFQVTLPAMLFLSIVSSKHDFSSSTS-LVVY 87

Query: 72  AAVGLAVMASLVVGGRALGWSRPERAGAAMAAGV-GNSAFLAVPVTAAVLGAETARLVAG 130
           + +   +     +        RP   G     G   N+A + +   A   G     L A 
Sbjct: 88  SLIANMLFFLFTLFSTRKLIDRPHDWGVITQGGFRANTAIIGLAYVANTYGNAGVALAAI 147

Query: 131 AIAADFVVLAAAGVGLL-------GWAAGRSVWRAMAQAFQNPVVIAALLGLLLALLNLA 183
            +A+  V+     V  L       GW AG+ +++ + +   NP++I+ +LG L  L ++ 
Sbjct: 148 YVASTTVLFNIQAVIALTPRGESNGWQAGKLMFKTLTK---NPLIISIVLGFLCYLASVP 204

Query: 184 LPQPLDRAVGLAAASGSPVGLVALGAALGLPQTEDEPGPRAGPVVLAALAKLLAFPLLVW 243
           +P+ +  A    A    P+ L+  G +L L   +D+          A   KL+  PLL+ 
Sbjct: 205 IPKIVTDAGHYFANMTLPLALLCTGGSLNLNSLKDD----RHSAWFATGYKLILSPLLIT 260

Query: 244 LAIGLTPAPAEFRTGATLVAAAPTAVNVFIQTRAYGVWPRGAARIVALTTALAIVSLSLV 303
               L            L+ +APTA   ++  RA G     AA I+ALTT  ++ + +L 
Sbjct: 261 GGAWLLGFRGLDLGLLFLMTSAPTAAASYVMARAMGGNATLAANIIALTTVFSLFTCTLG 320

Query: 304 AILLTA 309
             LL++
Sbjct: 321 IFLLSS 326