Pairwise Alignments

Query, 418 a.a., DNA polymerase IV-kappa DinB from Caulobacter crescentus NA1000

Subject, 369 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

 Score =  222 bits (566), Expect = 1e-62
 Identities = 134/344 (38%), Positives = 185/344 (53%), Gaps = 9/344 (2%)

Query: 38  IAHMDCDAFYASVEKRDDPSLRDLPVIIGGGK-RGVVTTACYIARMSGAKSAMPMFKALK 96
           I H+D DAFYASVE+RD+P LR  PV +G  + RGVV  A Y AR  G  SAMP   A +
Sbjct: 19  IIHIDMDAFYASVEQRDNPELRGKPVAVGYPEARGVVAAASYEARKFGVHSAMPSVTAKR 78

Query: 97  LCPDAVVIKPNFAKYKEESRRIHEKLDRLTPLIQPLSLDEAWIDLTGTERLHGATPAQML 156
            CP+ + +   F  Y+  SR+I       TPL++PLSLDEA++D+T  E   G   A  +
Sbjct: 79  KCPELIFVPHRFDVYRAVSRQIQAIFAEYTPLVEPLSLDEAYLDVT--ENFRGLKLATEI 136

Query: 157 AR-LQAEIERDIGLTVSVGLAPNKFLAKIASELDKPRGFSAIGAAEAQSFLANKPVNILP 215
           A  ++  I  +  LT S G++ NKFLAK+AS+  KP G   I       F+   PV    
Sbjct: 137 AEEIRGRIRAETHLTASAGVSYNKFLAKMASDQRKPDGLFVITPKHGPDFVQALPVKKFH 196

Query: 216 GVGPATVASLAEIGLRTVGDIAAADLKLLANRLGSGGMRLHRLAHGQDSRIVDPDQARKT 275
           GVGPAT   +  +G+ T  D+ + DL  L    G  G   + +A G D R V PD+ RK+
Sbjct: 197 GVGPATAEKMKRLGIETGADLKSRDLAFLQQHFGKSGPYFYWIARGIDERKVKPDRIRKS 256

Query: 276 ISAETTFNDDLHKREDLEDELWPLCEKVAKQARQEGVAGRVATLKLRTPDFKIHTRRRTL 335
           I AE TF +D+H  E     L PL +KV       G+ G+  TLK++  DF   TR +T+
Sbjct: 257 IGAEDTFREDVHDLETARAGLKPLIDKVWHYCEASGIRGKTMTLKVKWADFTQITRSKTI 316

Query: 336 AVPTQTARTLFQVARELLS---AEPRGLAYRLIGAGLTEFVDAD 376
             P  +   + ++A  LLS     P+G+  RL+G  L+     D
Sbjct: 317 VAPIASVAEMSEIAELLLSPIFPAPKGI--RLLGVTLSSLDTVD 358