Pairwise Alignments

Query, 125 a.a., response regulator receiver protein DivK from Caulobacter crescentus NA1000

Subject, 1626 a.a., putative PAS/PAC sensor protein (RefSeq) from Shewanella sp. ANA-3

 Score = 81.6 bits (200), Expect = 4e-20
 Identities = 41/123 (33%), Positives = 73/123 (59%), Gaps = 2/123 (1%)

Query: 5    VLIVEDNELNMKLFHDLLEAQGYETLQTREGLSALSIARENKP--DLILMDIQLPEISGL 62
            +L+VEDN+LN ++  +LL  +G   +    G+  ++   ++    D ++MD+Q+P+I GL
Sbjct: 1288 LLVVEDNQLNREVIDELLTYEGATVVLAEGGIEGVTQVLDSGDMFDAVIMDMQMPDIDGL 1347

Query: 63   EVTKWLKEDDDLAHIPVVAVTAFAMKGDEERIREGGCEAYISKPISVVHFLETIKRLLER 122
            E T+ ++ D     +P++A+TA A + D++   E G  A++SKPI +   L  I RL+ R
Sbjct: 1348 EATRRIRADGRFDQLPILAMTANASQADKQECLEAGMNAHVSKPIDMQQLLPNILRLVGR 1407

Query: 123  QPA 125
              A
Sbjct: 1408 DAA 1410



 Score = 44.7 bits (104), Expect = 5e-09
 Identities = 29/126 (23%), Positives = 62/126 (49%), Gaps = 8/126 (6%)

Query: 4    KVLIVEDNELNMKLFHDLLEAQGYETLQTREGLSAL-----SIARENKPDLILMDIQLPE 58
            ++L+V+DN++  ++   +L   G        G  A+     + A   + D++LMD ++P+
Sbjct: 1142 RILVVDDNQITTEILSKILSDYGCVVETASGGYQAIEKVKQATANAQQFDVVLMDWRMPD 1201

Query: 59   ISGLEVTKWLKEDDDLAHIP-VVAVTAFAMK--GDEERIREGGCEAYISKPISVVHFLET 115
            I GL+  + LK     ++ P VV +TA+  +   + + I       +++KP++     E 
Sbjct: 1202 IDGLQTAEMLKNAGTGSYTPLVVMLTAYGHEVIAESQHINNVPFVNFLTKPVTSQILAEA 1261

Query: 116  IKRLLE 121
            +   +E
Sbjct: 1262 VLNAIE 1267