Pairwise Alignments

Query, 322 a.a., type IV secretory pathway, VirB11 ATPase from Caulobacter crescentus NA1000

Subject, 474 a.a., Flp pilus assembly protein, ATPase CpaF from Pseudomonas stutzeri RCH2

 Score =  173 bits (439), Expect = 7e-48
 Identities = 108/305 (35%), Positives = 167/305 (54%), Gaps = 22/305 (7%)

Query: 11  LAPLQPWLDRADVTDIWVNRPGEVWIETTKGVTSRLAAPDLTDQALQRLARQIAAASHQG 70
           L PL+P L    V+DI VN    V++E   G   R       DQ L  +  +I ++  + 
Sbjct: 117 LGPLEPLLADGTVSDILVNGHASVYVER-HGKLQRTDVRFRDDQHLLNIIDRIVSSLGRR 175

Query: 71  VSREQPLLSASLPNGARVQIIAPPATRGDLALAIRKHTLSDLSLSDLAIGGTLAPPALTG 130
           +    PL+ A L +G+RV  I PP      +L+IR+  +  LS   L   GTL P     
Sbjct: 176 IDESSPLVDARLKDGSRVNAIIPPLAIDGPSLSIRRFAVDLLSAESLVEMGTLTPAI--- 232

Query: 131 RADADAQLRALLSAGDVEGFLRTAIQRRKTIVLSGGTSSGKTTLLNALVKEIPAHERLVL 190
                    AL+        L+  ++ R  +++SGGT +GKTT+LN L   IP +ER+V 
Sbjct: 233 ---------ALV--------LKAIVRGRLNVLVSGGTGTGKTTMLNVLSSFIPHNERIVT 275

Query: 191 IEDAPEIQLRHENAIGLIAARSDT-GEAQVDAEDLLQASLRMRPDRILLGELRGREAFAF 249
           IED+ E+QL+  + + L    ++  G  +++  +L++ SLRMRPDRI++GE+RG EA   
Sbjct: 276 IEDSAELQLQQPHVVRLETRPANIEGRGEINQRELVRNSLRMRPDRIVIGEVRGPEALDM 335

Query: 250 LRAVNTGHPGSITTVHADSPQGALDQIALLSLLAGVDLGWDTVRNYVRQVVDIVVQLNRV 309
           L A+NTGH GSITT+HA+SP+ AL +I  +  ++G       +R  +   +D+V+QL R 
Sbjct: 336 LAAMNTGHDGSITTIHANSPRDALGRIENMVSMSGATFPIKALRQQIASAIDVVLQLERH 395

Query: 310 GGGRK 314
             G++
Sbjct: 396 EDGKR 400