Pairwise Alignments

Query, 322 a.a., type IV secretory pathway, VirB11 ATPase from Caulobacter crescentus NA1000

Subject, 466 a.a., pilus assembly protein from Sinorhizobium meliloti 1021

 Score =  175 bits (443), Expect = 2e-48
 Identities = 109/309 (35%), Positives = 169/309 (54%), Gaps = 25/309 (8%)

Query: 13  PLQPWLDRADVTDIWVNRPGEVWIETTKGVT-SRLAAPDLTDQALQRLARQIAAASHQGV 71
           PL+P L R D+ DI VN  G+++IE    V  S +   D  +  L  + ++I +   + V
Sbjct: 112 PLEPLLARDDIADIMVNGAGQIFIEVGGKVEESEIRFRD--NGQLLSICQRIVSQVGRRV 169

Query: 72  SREQPLLSASLPNGARVQIIAPPATRGDLALAIRKHTLSDLSLSDLAIGGTLAPPALTGR 131
               P+  A LP+G+RV +IAPP      AL IRK     L+L  L   G++ P A    
Sbjct: 170 DESSPICDARLPDGSRVNVIAPPLAIDGTALTIRKFKKDKLTLEQLVRFGSITPEAAV-- 227

Query: 132 ADADAQLRALLSAGDVEGFLRTAIQRRKTIVLSGGTSSGKTTLLNALVKEIPAHERLVLI 191
                              L+   + R  IV+SGGT SGKTTLLN L + I + ER++  
Sbjct: 228 ------------------LLQIIGRVRCNIVISGGTGSGKTTLLNCLTRYIDSTERIITC 269

Query: 192 EDAPEIQLRHENAIGLIAARSDT-GEAQVDAEDLLQASLRMRPDRILLGELRGREAFAFL 250
           ED+ E+QL+  + + L     +  GE ++   DL++  LRMRP+RI++GE+RG E F  L
Sbjct: 270 EDSAELQLQQPHVVRLETRPPNIEGEGEITMRDLVKNCLRMRPERIIVGEVRGPEVFDLL 329

Query: 251 RAVNTGHPGSITTVHADSPQGALDQIALLSLLAGVDLGWDTVRNYVRQVVDIVVQLNRV- 309
           +A+NTGH GS+ T+HA++P+  L ++  +  + G  L   TVR  +   VD+++Q +R+ 
Sbjct: 330 QAMNTGHDGSMGTIHANTPRECLSRMESMIAMGGYTLPARTVREIISGSVDVIIQASRLR 389

Query: 310 GGGRKVTAV 318
            G R++T +
Sbjct: 390 DGSRRITHI 398