Pairwise Alignments

Query, 322 a.a., type IV secretory pathway, VirB11 ATPase from Caulobacter crescentus NA1000

Subject, 323 a.a., P-type conjugative transfer ATPase TrbB from Sphingomonas koreensis DSMZ 15582

 Score =  133 bits (335), Expect = 5e-36
 Identities = 103/305 (33%), Positives = 157/305 (51%), Gaps = 41/305 (13%)

Query: 17  WLDRADVTDIWVNRPGEVWIETTKG----VTSRLAAPDLTDQALQRLARQIAAASHQGVS 72
           +L+   V ++ +N  G +W++           RL+A D  ++ ++ +A  + A  H G  
Sbjct: 29  FLEDPSVVEVMLNPDGRLWVDRLSAGLADTGERLSAAD-GERIVRLVAHHVGAEVHAGA- 86

Query: 73  REQPLLSASLPN-GARVQIIAPPATRGDLALAIRKHTLSDLSLSDLAIGGTLAPPALTGR 131
              P +SA LP  G R + + PP        AIRK  ++  +L+D      +A       
Sbjct: 87  ---PRVSAELPGTGERFEGLLPPVVAAP-CFAIRKPAVAVFTLADYVAANIMA------- 135

Query: 132 ADADAQLRALLSAGDVEGFLRTAIQRRKTIVLSGGTSSGKTTLLNALVKEIP-AHERLVL 190
                       AG  E  LR A+  R  I+++GGTS+GKTTL NAL+ E+    +R+VL
Sbjct: 136 ------------AGSAET-LREAVLSRANILVAGGTSTGKTTLTNALLAEVAKTSDRVVL 182

Query: 191 IEDAPEIQLRHENAIGLIAARSDTGEAQVDAEDLLQASLRMRPDRILLGELRGREAFAFL 250
           IED  E+Q    N   L+A R+  G A +   DL+++SLR+RPDRI +GE+RG EA   L
Sbjct: 183 IEDTRELQCLTPN---LVALRTKDGVASLS--DLVRSSLRLRPDRIPIGEVRGAEALDLL 237

Query: 251 RAVNTGHPGSITTVHADSPQGALDQIALLSLLAGVDLGWDTVRNYVRQVVDIVVQLNRVG 310
           +A  TGHPG I T+H+ S  GAL ++  L   A V +     R  V + +D++  L   G
Sbjct: 238 KAWGTGHPGGIGTIHSGSAIGALRRLEQLIQEAVVTV----PRALVAETIDVIAVLAGRG 293

Query: 311 GGRKV 315
             R++
Sbjct: 294 PDRRL 298