Pairwise Alignments

Query, 322 a.a., type IV secretory pathway, VirB11 ATPase from Caulobacter crescentus NA1000

Subject, 336 a.a., P-type conjugative transfer ATPase TrbB from Sphingomonas koreensis DSMZ 15582

 Score =  137 bits (344), Expect = 5e-37
 Identities = 98/274 (35%), Positives = 149/274 (54%), Gaps = 40/274 (14%)

Query: 56  LQRLARQIAAASHQGVSREQPLLSASLPN-----GARVQIIAPPATRGDLALAIRKHTLS 110
           ++R+ R +A+ +   V    P++SA LP      G R + + PP + G    +IRK    
Sbjct: 63  VERIIRLVASHARAEVHASAPIISAELPPHGEGAGERFEGVLPPVSLGP-CFSIRKPAAK 121

Query: 111 DLSLSDLAIGGTLAPPALTGRADADAQLRALLSAGDVEGFLRTAIQRRKTIVLSGGTSSG 170
             +L D    G ++           A++  LLS   VE         R+ I+++GGTSSG
Sbjct: 122 IYTLLDYVTDGLMS-----------AEIARLLSLAVVE---------RRNILVAGGTSSG 161

Query: 171 KTTLLNALVKEIPAH--ERLVLIEDAPEIQLRHENAIGL-IAARSDTGEAQVDAEDLLQA 227
           KTTL NAL+ E+ AH  ER++LIED  E+Q    + + L   A    G A V   DL+++
Sbjct: 162 KTTLANALLAEM-AHLDERVLLIEDTRELQCAAPDVVALRTRAAGGAGGASVTMADLVRS 220

Query: 228 SLRMRPDRILLGELRGREAFAFLRAVNTGHPGSITTVHADSPQGA---LDQIALLSLLAG 284
           +LR+RPDRI++GE+RGREA   L+A NTGHPG I TVHA+S   A   L+Q+   S++A 
Sbjct: 221 TLRLRPDRIIVGEVRGREALDMLKAWNTGHPGGIATVHANSAVAALYRLEQLVQESVIA- 279

Query: 285 VDLGWDTVRNYVRQVVDIVVQLNRVGGGRKVTAV 318
                   R  + + +D++V ++  G  R+V  +
Sbjct: 280 ------VPRRLIAEAIDMIVFISGRGLARRVETI 307