Pairwise Alignments

Query, 322 a.a., type IV secretory pathway, VirB11 ATPase from Caulobacter crescentus NA1000

Subject, 454 a.a., CpaF family protein from Ralstonia sp. UNC404CL21Col

 Score =  177 bits (450), Expect = 3e-49
 Identities = 108/309 (34%), Positives = 175/309 (56%), Gaps = 23/309 (7%)

Query: 13  PLQPWLDRADVTDIWVNRPGEVWIETTKGVTSRLAAPDLTDQALQRLARQIAAASHQGVS 72
           PL+P L    V+DI VN    V++E  +G     +     D  L R+  ++ +   + + 
Sbjct: 101 PLEPLLADPTVSDILVNTHKYVYVER-RGKLELTSVTFHDDAHLMRVIEKMVSRVGRRID 159

Query: 73  REQPLLSASLPNGARVQIIAPPATRGDLALAIRKHTLSDLSLSDLAIGGTLAPPALTGRA 132
              P++ A LP+G+R+  I PP+      L+IR+ +++ L++ DL    T+ P       
Sbjct: 160 ESSPMVDARLPDGSRINAIIPPSAIDGPLLSIRRFSVNPLTIQDLVNFRTMTP------- 212

Query: 133 DADAQLRALLSAGDVEGFLRTAIQRRKTIVLSGGTSSGKTTLLNALVKEIPAHERLVLIE 192
               ++  LL A          ++ +  I++SGGT SGKTTLLN L   IPA+ER+V IE
Sbjct: 213 ----EMAQLLDA---------MVKAKLNILISGGTGSGKTTLLNILSGYIPANERIVTIE 259

Query: 193 DAPEIQLRHENAIGLIAARSDT-GEAQVDAEDLLQASLRMRPDRILLGELRGREAFAFLR 251
           DA E+QLR  + + L    ++  G  ++    L++ +LRMRPDRI+LGE+RG EA   L 
Sbjct: 260 DAAELQLRQNHVLRLETRPANIEGRGEITQRSLVKNALRMRPDRIILGEVRGAEALDMLH 319

Query: 252 AVNTGHPGSITTVHADSPQGALDQIALLSLLAGVDLGWDTVRNYVRQVVDIVVQLNRV-G 310
           A+NTGH GS+ T+HA++P+ AL ++  +  +AG+ L   T+R  +   + +VVQ+ R+  
Sbjct: 320 AMNTGHEGSLATIHANTPRDALTRLENMVSMAGLQLPTKTMRQQITSALTVVVQVTRLTD 379

Query: 311 GGRKVTAVE 319
           G RK+ +V+
Sbjct: 380 GNRKLVSVQ 388