Pairwise Alignments

Query, 322 a.a., type IV secretory pathway, VirB11 ATPase from Caulobacter crescentus NA1000

Subject, 309 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

 Score =  147 bits (372), Expect = 2e-40
 Identities = 105/311 (33%), Positives = 158/311 (50%), Gaps = 23/311 (7%)

Query: 16  PWLDRADVTDIWVNRPGEVWIETTKGVTSRLAAPDLTDQALQRLARQIAAASHQGVSREQ 75
           P+LD  D  +I VN  GE+W    KG       P+LT + L  + R +A  S +   R  
Sbjct: 1   PFLDDEDTQEIVVNEVGEIW-SWKKGKWVVDKVPELTLEVLDSIGRNLANFSRKTFDRHH 59

Query: 76  PLLSASLP-NGARVQIIAPPATRGDLA-LAIRKHTLSDLSLSDLAIGG----------TL 123
             LSA +P  G R+++  PP    +   L +RKH++       L   G          + 
Sbjct: 60  TSLSAFMPVTGERIEMTHPPTCPENTRYLNVRKHSVHTFQHESLVKAGYYEKTRHEFSSS 119

Query: 124 APPALTGR-----ADADAQLRALLSAGDVEGFLRTAIQRRKTIVLSGGTSSGKTTLLNAL 178
            P            D + +L  L++ G    F+  A++  + IV SG T SGKT+ L +L
Sbjct: 120 VPKERRDELFEHLTDEEKELWTLITTGRFSEFMEKAVEHHQNIVASGATGSGKTSYLRSL 179

Query: 179 VKEIPAHERLVLIEDAPEIQL-RHENAIGLIAARSDTGEAQVDAEDLLQASLRMRPDRIL 237
            + I   ER++  ED PE+ L  H N   L   ++D GE  V+A+D+L + +R  P+R+L
Sbjct: 180 CEFIDHDERIITAEDTPEMPLPNHRNRNSLFYKKTDDGEG-VNAKDVLHSVMRKTPNRVL 238

Query: 238 LGELRGREAFAFLRAV-NTGHPGSITTVHADSPQGALDQIALL--SLLAGVDLGWDTVRN 294
           + ELRG EA  +L  V ++GHPG +TT HA+SP+ A  ++ALL     AG  L    +  
Sbjct: 239 MAELRGDEAMYYLSGVLSSGHPGGLTTTHANSPKDAFFRLALLIKQSDAGQGLELQDILM 298

Query: 295 YVRQVVDIVVQ 305
            +RQ V++VVQ
Sbjct: 299 LLRQTVNVVVQ 309