Pairwise Alignments

Query, 322 a.a., type IV secretory pathway, VirB11 ATPase from Caulobacter crescentus NA1000

Subject, 634 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

 Score =  184 bits (466), Expect = 7e-51
 Identities = 113/310 (36%), Positives = 170/310 (54%), Gaps = 23/310 (7%)

Query: 11  LAPLQPWLDRADVTDIWVNRPGEVWIETTKGVTSRLAAPDLTDQALQRLARQIAAASHQG 70
           L PL+  L    V++I VN   E+++E   G   R       D+A+     +I A   + 
Sbjct: 282 LGPLEELLADPTVSEIMVNCHDEIFVEQA-GQLKRTPVIFTDDRAVIGAIERIVAPIGRR 340

Query: 71  VSREQPLLSASLPNGARVQIIAPPATRGDLALAIRKHTLSDLSLSDLAIGGTLAPPALTG 130
           +    P++ A L +G+RV  + PP      ++ IRK +   L   DL   GT++P  L  
Sbjct: 341 IDESSPMVDARLADGSRVNAVIPPLALKGPSITIRKFSKRKLVGQDLLNFGTMSPEMLE- 399

Query: 131 RADADAQLRALLSAGDVEGFLRTAIQRRKTIVLSGGTSSGKTTLLNALVKEIPAHERLVL 190
                              FL TA+++   I++SGGT SGKTTLLN L   IP  ER+V 
Sbjct: 400 -------------------FLHTAVEQGANIIISGGTGSGKTTLLNVLSSYIPDSERIVT 440

Query: 191 IEDAPEIQLRHENAIGLIAARSDT-GEAQVDAEDLLQASLRMRPDRILLGELRGREAFAF 249
           +EDA E+QL   N + L A  ++  G+  +   DL++  LRMRPDRI++GE RG EA   
Sbjct: 441 VEDAAELQLSQPNLVSLEARPANMEGKGAIHIRDLVKNCLRMRPDRIVIGECRGGEALDM 500

Query: 250 LRAVNTGHPGSITTVHADSPQGALDQIALLSLLAGVDLGWDTVRNYVRQVVDIVVQLNRV 309
           L+A+NTGH GS+TT HA++P+  + ++ +++L+AG+DL    +R  +   VDI+VQ +R 
Sbjct: 501 LQAMNTGHDGSLTTAHANTPRDCIARLEVMTLMAGLDLPVQAIREQICSAVDIIVQQSRF 560

Query: 310 G-GGRKVTAV 318
             G R+VT V
Sbjct: 561 SCGSRRVTHV 570