Pairwise Alignments

Query, 322 a.a., type IV secretory pathway, VirB11 ATPase from Caulobacter crescentus NA1000

Subject, 469 a.a., pilus assembly protein CpaF from Burkholderia phytofirmans PsJN

 Score =  171 bits (433), Expect = 3e-47
 Identities = 104/307 (33%), Positives = 161/307 (52%), Gaps = 22/307 (7%)

Query: 9   AYLAPLQPWLDRADVTDIWVNRPGEVWIETTKGVTSRLAAPDLTDQALQRLARQIAAASH 68
           A   P++  L    V DI +N   +V++ +  G+ +R+      +  L R+ R+I A   
Sbjct: 86  AGFGPIEDLLADPAVEDILINGYNDVYV-SRHGILTRIQVRFADNAHLLRIVRRILAPIG 144

Query: 69  QGVSREQPLLSASLPNGARVQIIAPPATRGDLALAIRKHTLSDLSLSDLAIGGTLAPPAL 128
           + +    P++ A LPNG RV ++  P +     ++IRK     +   DL   GT +P   
Sbjct: 145 RRLDESNPMVDARLPNGGRVNVVIEPLSIDGPIVSIRKFRKDPMRPDDLLGNGTYSP--- 201

Query: 129 TGRADADAQLRALLSAGDVEGFLRTAIQRRKTIVLSGGTSSGKTTLLNALVKEIPAHERL 188
                            ++   L  A+  R  +++SGGTSSGKT+LLNAL   IP  ER+
Sbjct: 202 -----------------EIGALLEAAVAARCNVLVSGGTSSGKTSLLNALAFHIPEPERV 244

Query: 189 VLIEDAPEIQLRHENAIGLIAARSD-TGEAQVDAEDLLQASLRMRPDRILLGELRGREAF 247
           V IED  E+ L H + + L +      G   V   DLL+ +LRMRPDRI++GE+RG E  
Sbjct: 245 VTIEDTAELSLNHPHVVRLESRPGGFDGSGIVTIRDLLRNTLRMRPDRIIVGEVRGGEVL 304

Query: 248 AFLRAVNTGHPGSITTVHADSPQGALDQIALLSLLAGVDLGWDTVRNYVRQVVDIVVQLN 307
             L+A+NTGH GS+ TVHA SP+  L ++ +L+  AG      ++R  +   +D +VQ+ 
Sbjct: 305 EMLQAMNTGHDGSMGTVHASSPRECLYRLEMLAGFAGFQGTESSLRRQIANAIDFIVQIG 364

Query: 308 RVGGGRK 314
           R+  GR+
Sbjct: 365 RLSNGRR 371