Pairwise Alignments

Query, 322 a.a., type IV secretory pathway, VirB11 ATPase from Caulobacter crescentus NA1000

Subject, 375 a.a., type IV secretion system protein VirB11 from Burkholderia phytofirmans PsJN

 Score =  171 bits (432), Expect = 3e-47
 Identities = 108/313 (34%), Positives = 164/313 (52%), Gaps = 15/313 (4%)

Query: 11  LAPLQPWLDRADVTDIWVNRPGEVWIETTKGVTSRLAAPDLTDQALQRLARQIAAASHQG 70
           + P    LD + VT++ +NRP  V  ET  G      A DL  + L   A  +A  ++Q 
Sbjct: 32  MRPFAGLLDDSSVTELVINRPQRVLTETHLGWQPHDCA-DLDFERLMSFAVAVATLTNQE 90

Query: 71  VSREQPLLSASLPNGARVQIIAPPATRG-DLALAIRKHTLSDLSLSDLAIGGTLAPPALT 129
           VS   P+LSA LP  AR+QI+ PP      +++ IR+ +  + +L      G        
Sbjct: 91  VSARHPILSALLPGDARIQIVVPPVVPPRTVSITIRRPSAREKTLDAYRSEGLFGEAVWR 150

Query: 130 GRADADAQLRAL----------LSAGDVEGFLRTAIQRRKTIVLSGGTSSGKTTLLNALV 179
            + + D    AL          L A D   F   A++ R  IV+ G T SGKT+ +  L 
Sbjct: 151 RQDELDTSRPALRPAVNRLLHYLEARDWSTFFDLAVKARLNIVVVGNTGSGKTSFMRTLC 210

Query: 180 KEIPAHERLVLIEDAPEIQLRH-ENAIGLIAARSDTGEAQVDAEDLLQASLRMRPDRILL 238
           + IP+ ER++ IED  E+ +RH EN++ L+ ++   G+A V   DL+  ++RMRPDR+LL
Sbjct: 211 RSIPSSERIITIEDVRELFIRHIENSVHLLYSKGGHGQADVTPADLIACTMRMRPDRVLL 270

Query: 239 GELRGREAFAFLRAVNTGHPGSITTVHADSPQGALDQIALLSLLAGVDLGWD--TVRNYV 296
            ELRG EA+ FL+ + TGH GSIT+ HA S   A+++ AL++        WD   +R  +
Sbjct: 271 AELRGAEAYDFLKLLTTGHSGSITSYHASSASVAIERFALMAKEHPEAATWDDAALRRLL 330

Query: 297 RQVVDIVVQLNRV 309
              +D+V  +  V
Sbjct: 331 FMTIDVVAHMEAV 343