Pairwise Alignments

Query, 191 a.a., conserved integral membrane protein from Caulobacter crescentus NA1000

Subject, 184 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

 Score =  177 bits (449), Expect = 1e-49
 Identities = 95/181 (52%), Positives = 127/181 (70%), Gaps = 3/181 (1%)

Query: 1   MESLLVSTLVVAIAEIGDKTQLLAIILATRFKKPIPIIMGILVATLANHALAATAGYWVA 60
           M  L +S   VA+AEIGDKTQLL+++LA+R++KPIPII  I +ATLANHALAA  G  VA
Sbjct: 1   MSVLAISITTVALAEIGDKTQLLSLLLASRYRKPIPIIAAIFLATLANHALAAWLGVVVA 60

Query: 61  DFLSGAWFRWAIAVSFIAMAAWALIPDKADDEEGDAAGRYGVFLTTTIAFFLVEMGDKTQ 120
           D+LS    +W + VSF+AMA W LIPDK D EE  +    G F+ + IAFF+ E+GDKTQ
Sbjct: 61  DYLSPDILKWVLVVSFLAMAGWILIPDKLDGEE--SISTRGPFVASFIAFFMAEIGDKTQ 118

Query: 121 IATVALGAKF-QSIALVAAGTTLGMMLANVPAVYLGEAATKVVPLKYVRIGAAVIFLALG 179
           IAT  LGA++  +++ V  GTTLGM+LANVP V +G+ +   +PL  +R   A +FL + 
Sbjct: 119 IATSILGAQYADALSWVIVGTTLGMLLANVPVVLIGKLSADKMPLGLIRKVTAGLFLLMA 178

Query: 180 V 180
           +
Sbjct: 179 L 179



 Score = 35.0 bits (79), Expect = 8e-07
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)

Query: 106 TTIAFFLVEMGDKTQIATVALGAKFQSIALVAAGTTLGMMLANVPAVYLGEAATKVVPLK 165
           TT+A  L E+GDKTQ+ ++ L ++++    + A   L  +  +  A +LG      +   
Sbjct: 9   TTVA--LAEIGDKTQLLSLLLASRYRKPIPIIAAIFLATLANHALAAWLGVVVADYLSPD 66

Query: 166 YVRIGAAVIFLALGVW 181
            ++    V FLA+  W
Sbjct: 67  ILKWVLVVSFLAMAGW 82