Pairwise Alignments

Query, 596 a.a., very-long-chain acyl-CoA synthetase from Caulobacter crescentus NA1000

Subject, 557 a.a., long-chain-fatty-acid--CoA ligase (RefSeq) from Shewanella sp. ANA-3

 Score =  120 bits (301), Expect = 1e-31
 Identities = 149/575 (25%), Positives = 219/575 (38%), Gaps = 81/575 (14%)

Query: 27  IAPDSPNLICDDLEAAVDKWGPRPAITFEGKTITYADLDAMANRYAHWAKG-LGLTRGQT 85
           I  D  + + D  E AV K+  +PA    G T+TY  L+  +  +A + +  L L +G  
Sbjct: 17  INADQYSSLVDMFETAVAKYADQPAFINMGATLTYRKLEERSRAFAAYLQNELKLQKGDR 76

Query: 86  VALFMPNRIEYLAIWYGLTKVGVATALINNQLTGAALAHCLTISQAMHCIVDAETSPCFE 145
           VAL MPN ++Y    +G+ + G+    +N   T   L H L  S A   +V +  +   E
Sbjct: 77  VALMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELKHQLVDSGAKAIVVVSNFARTLE 136

Query: 146 DVKGQLERHMQQWVLGPVHDDQRDLLKA---------LKSCSQLRPD---------RETA 187
           +V  Q        V   +     DLL A         +K   +L P          RET 
Sbjct: 137 EVVDQTP------VKSVIITGLGDLLSAPKRTLVNFVVKYIKKLVPKYDLPHALSMRETL 190

Query: 188 REG---------LTASDTALYIYTSGTTGLPKAARITHMR--AQLYMRGFAGSTGAKDTD 236
             G         +T  D A   YT GTTG+ K A +TH    A +     A S   +D +
Sbjct: 191 SRGRRMQYVKPVITGDDLAFLQYTGGTTGVSKGAMLTHKNVVANVLQANGAYSPALRDGN 250

Query: 237 RIYIT-LPLYHATGGLCALGAALLNGGS--VVLRKKFSATHFWPEIVAEQCTMFVYIGEL 293
              +T LPLYH    L       L+ GS  +++        F  E+     T    +  L
Sbjct: 251 EFVVTALPLYHIFA-LTVNCLLFLHKGSQNLLITNPRDIPGFVAELKKYPFTALTGVNTL 309

Query: 294 CRYLANQPEHELERAHKLRMIFGNGLR-----ADVWDDMLDRFKVGDVLEFYGATEGNVS 348
              L N  +       +L++  G G+      AD W  +        +LE YG TE +  
Sbjct: 310 FNALVNSSDFAELDFSRLKLSIGGGMAVQKAVADKWQSITKT----RLLEGYGLTEASPL 365

Query: 349 F----FNFDGKRGAIGRIPSYLRKKFNIRIVKFDVETETPIRGPDGCCIEAGPEEVGECI 404
                +N DG  G+IG  P+                T   +R   G  +  G  E GE  
Sbjct: 366 LTCCPYNLDGYNGSIG-FPA--------------PSTLIQVRDDAGNVLPQG--ETGELF 408

Query: 405 GHIGSDARSNFTGYADKAATEKKVLHDVFEKGDAWFRTGDLMKVDHDGYIYFIDRIGDTF 464
           G           GY  +     KV+       D W  TGD+  +D  G+ Y +DR  D  
Sbjct: 409 GK----GPQIMKGYWQRPEETAKVIDK-----DGWLATGDIGYMDEQGFFYIVDRKKDMI 459

Query: 465 RWKGENVATSEVAERLAGFEGVLEVNVYGVKVGDLDGKAGMASLVT-EGDFDLEAFAKYV 523
              G NV  +EV E +A    V+EV   GV   D  G+     +V  +     +   K+ 
Sbjct: 460 LVSGFNVFPNEVEEVVALHPKVIEVAAVGVP-NDASGELVKVFVVAKDKSLTADDIIKHC 518

Query: 524 DEALPSYARPLFVRLQKAIETTGTFKYRKIDLVNE 558
              L  Y  P  V  +  +  T   K  + +L +E
Sbjct: 519 RAHLTGYKVPKLVEFRDELPKTNVGKILRRELRDE 553