Pairwise Alignments

Query, 336 a.a., trans-isoprenyl diphosphate synthase from Caulobacter crescentus NA1000

Subject, 333 a.a., trans-hexaprenyltranstransferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  288 bits (736), Expect = 2e-82
 Identities = 163/323 (50%), Positives = 210/323 (65%), Gaps = 1/323 (0%)

Query: 12  SGSVDRLVRLAEADMAGVNRLITDRMQSDVAIIPALAEHLIAAGGKRLRPLMTVAAARLA 71
           S  ++ + +LA+ADM  VN+LI  +++SDVA+I  L  ++I  GGKRLRPL++V AAR  
Sbjct: 10  SMDLNAIRQLADADMQAVNQLIYKQLESDVALINQLGFYIINGGGKRLRPLLSVLAARAV 69

Query: 72  GADNDHFQKLAAAVEFIHTATLLHDDVVDGSQLRRGKVAAHLIWGGAQSVLVGDFLFARA 131
             + +   KLAA +EFIHTA+LLHDDVVD S LRRG+  A+ ++G + SVLVGDFL+ R+
Sbjct: 70  NYNGEGHLKLAAIIEFIHTASLLHDDVVDESTLRRGRETANALFGNSASVLVGDFLYTRS 129

Query: 132 FELMVETNSMKALEILARASRVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAAS 191
           F++M E  SMK L++LA A+ V+AEGEVLQLM  +D N ++  Y+ +I  KTA+LF AA+
Sbjct: 130 FQMMTELGSMKVLQVLADATNVLAEGEVLQLMNCNDPNTTEESYMRVIYCKTAKLFEAAT 189

Query: 192 EAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDALDYGGATETLGKNAGDDFREGKATLP 251
              AV AG D    EAL DYG  LG AFQL DD LDY    E LGKN GDD  EGK TLP
Sbjct: 190 RLAAVLAGSDEKVEEALADYGKYLGTAFQLIDDLLDYTSDAEELGKNIGDDLAEGKPTLP 249

Query: 252 LLLAIARSGPREAEFWERAIGRREQTEADFRRARELIIGSGALDATLDLAADYADKAKAA 311
           L+ AI     RE      AI + + T A        +   GALD T   A + ADKA AA
Sbjct: 250 LIYAIGHGNEREQGLIRNAIEKADGTGA-IEEILTALHRCGALDYTRRRAEEEADKAIAA 308

Query: 312 LAMFPANDWREALEELADFAVSR 334
           L++ P  D++ ALE LA  AVSR
Sbjct: 309 LSVLPEGDFKTALESLARIAVSR 331