Pairwise Alignments

Query, 336 a.a., trans-isoprenyl diphosphate synthase from Caulobacter crescentus NA1000

Subject, 331 a.a., Polyprenyl synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  188 bits (478), Expect = 1e-52
 Identities = 113/315 (35%), Positives = 169/315 (53%), Gaps = 13/315 (4%)

Query: 33  ITDRMQSDVAIIPAL----AEHLIAAGGKRLRPLMTVAAARLAGADNDH-FQK------- 80
           I   + ++VA++  L    AEH++ AGGKRLRPL+T+  AR  GA+    F+K       
Sbjct: 15  INKTLDAEVAVLHPLVRPVAEHVLRAGGKRLRPLLTLLTARALGAEGGGLFRKSSGPDLY 74

Query: 81  -LAAAVEFIHTATLLHDDVVDGSQLRRGKVAAHLIWGGAQSVLVGDFLFARAFELMVETN 139
            LA +VE +H+ATLLHDD++DG+ LRRG  AAH ++G  ++VL GD L A A  ++    
Sbjct: 75  PLACSVELLHSATLLHDDILDGADLRRGLPAAHTMFGQTETVLAGDALLALANRIVARYG 134

Query: 140 SMKALEILARASRVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAGAVSAG 199
             +  E +A A    A GE++++      +     Y++II  KTA +  A+ E GA++A 
Sbjct: 135 DARLTETIAEAIVQTATGEIVEIAHQRSTDHGHDTYIDIITGKTAWMLRASCELGALAAQ 194

Query: 200 VDVAKSEALRDYGLNLGLAFQLADDALDYGGATETLGKNAGDDFREGKATLPLLLAIARS 259
                 +A   +GLNLG+AFQ+ DDALD+  +++  GK  G D REGK T PL+  +   
Sbjct: 195 APDEAVQAAAGFGLNLGIAFQIVDDALDFAASSKDTGKPVGGDLREGKLTPPLIYYLETL 254

Query: 260 GPREAEFWERAIGRREQTEADFRRARELIIGSGALDATLDLAADYADKAKAALAMFPAND 319
            P+E + +     +    +A        +   G    T  LAA Y DKA A L   P   
Sbjct: 255 TPQERDAFVTRFRQGTFDDATVAEVAADLRARGCDAKTRQLAASYLDKASACLDALPDTP 314

Query: 320 WREALEELADFAVSR 334
            R  L +  D+ ++R
Sbjct: 315 ERRILRQSIDYVLNR 329