Pairwise Alignments

Query, 336 a.a., trans-isoprenyl diphosphate synthase from Caulobacter crescentus NA1000

Subject, 334 a.a., Polyprenyl synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  302 bits (774), Expect = 7e-87
 Identities = 168/335 (50%), Positives = 217/335 (64%), Gaps = 6/335 (1%)

Query: 1   MDAAAATLPRKSGSVDRLVRLAEADMAGVNRLITDRMQSDVAI-IPALAEHLIAAGGKRL 59
           +D  AAT P      +RL      DM  VN LI +RM S+ A  IP +  HL+ AGGKRL
Sbjct: 3   LDTPAATKPH-----ERLATHLAEDMDAVNVLIRERMASEHAPRIPEVTAHLVEAGGKRL 57

Query: 60  RPLMTVAAARLAGADNDHFQKLAAAVEFIHTATLLHDDVVDGSQLRRGKVAAHLIWGGAQ 119
           RP++T+A ARL G    +   LAA VEFIHTATLLHDDVVD S  RRG+  A+L+W    
Sbjct: 58  RPMLTLATARLCGYTGPYHVHLAATVEFIHTATLLHDDVVDESNQRRGRPTANLLWDNQS 117

Query: 120 SVLVGDFLFARAFELMVETNSMKALEILARASRVIAEGEVLQLMRSHDLNLSQAVYLEII 179
           SVLVGD+LFAR+F+LMVET S++ L+ILA A+  IAEGEVLQL  + DL   + +YL+++
Sbjct: 118 SVLVGDYLFARSFQLMVETGSLRVLDILANAAATIAEGEVLQLSAAQDLATDEDIYLKVV 177

Query: 180 QAKTAELFAAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDALDYGGATETLGKNA 239
           + KTA LF+AA+E G V AG D A+  AL  YG  LG+AFQ+ DD LDYGG +   GKN 
Sbjct: 178 RGKTAALFSAATEVGGVIAGADEAQVRALFTYGDALGIAFQIVDDLLDYGGDSTKTGKNI 237

Query: 240 GDDFREGKATLPLLLAIARSGPREAEFWERAIGRREQTEADFRRARELIIGSGALDATLD 299
           GDDFRE K TLP++ A+A++   E  FW R I + +Q + D   A  L+   GA+ AT  
Sbjct: 238 GDDFRERKLTLPVIKAVAKADLEERAFWSRVIEKGDQRDGDLEHALALLDRHGAMAATRA 297

Query: 300 LAADYADKAKAALAMFPANDWREALEELADFAVSR 334
            A  YA +AKAAL     +   + L +LAD+ V+R
Sbjct: 298 DAVAYAAQAKAALEAVAPHPLTDMLRDLADYVVAR 332