Pairwise Alignments

Query, 859 a.a., ATP-dependent helicase from Caulobacter crescentus NA1000

Subject, 644 a.a., recombinase RecQ from Pseudomonas fluorescens FW300-N2E3

 Score = 65.9 bits (159), Expect = 7e-15
 Identities = 108/430 (25%), Positives = 170/430 (39%), Gaps = 85/430 (19%)

Query: 23  RDHQLAMLDKARAGRGALLIAPTGGGKTLAGFLPSLIELAERPPRNTPAGVHTLYISPLK 82
           R  Q A +    AGR A  I PTG GK+L   LP+L+               TL +SPL 
Sbjct: 15  RPGQEAAVSAVLAGRSAAAIFPTGSGKSLCYQLPALL-----------LPHLTLVVSPLL 63

Query: 83  ALAVDVERNLLTPIREMGLPIVA--ESRTGDTGESRKARQKVRPPDILLTTPEQLALFCA 140
           AL  D     L  ++  G+   +   +++ D      AR +     IL+ + E+L     
Sbjct: 64  ALMQDQ----LAFLQRHGIAAASIDSAQSRDDANEVMARARSGELKILMISVERLKN--- 116

Query: 141 WEGAREYFSD--LRCVIIDEAHAIWPSKRGDLLALGLSRLQQFAPNMRRVGLSATVDDPD 198
            E  R +     +  +++DEAH I  S+ G            F P+  ++        PD
Sbjct: 117 -ERFRNFLQQVPISLLVVDEAHCI--SEWG----------HNFRPDYLKL--------PD 155

Query: 199 LVRKWLGVNRVENPPPRAGEVSAEPTEGASTADLQLALSGPPGHLPRAQGRICEPDIDLV 258
             R++          P+A  ++A  T     AD+Q            A+  I   D   V
Sbjct: 156 YQRQF--------NIPQALLLTATATPKV-IADMQ------------AKFAIAAND---V 191

Query: 259 LGAGGAQPVVEVLVSGGRVPWAGHTAEHAMAEVYDIIKAAKTALVFVNTRFQAEFAFQRL 318
           +  G  +P + +LV     P  G      + E +   +A + ++V+V  +  AE   Q L
Sbjct: 192 VTTGFYRPNLNLLVE----PVRGQDKRRRLVE-WMSQRAGQPSIVYVTLQKTAEQIAQHL 246

Query: 319 WELNDEGLPIALHHGSLSAEQRRKVEAAMARGELRAVVCTSTLDMGIDWGDVDLVIQLAA 378
              +  GL    +H  L  EQR  ++     G+   +V T    MGID  D+  V+    
Sbjct: 247 ---SQNGLQAEAYHAGLPHEQREAIQRRFMGGQSNCIVATIAFGMGIDKSDIRNVVHFDL 303

Query: 379 PKGASRMVQRIGRANHRLDEPSRAIFVPASRFEMLECRAAADAILENHLDGEPPRTGALD 438
           PK      Q IGRA  R  +PS  + V A+R  +         +LEN + G+ P    + 
Sbjct: 304 PKSIENYSQEIGRAG-RDGQPSDCL-VLANRDSL--------NVLENFVYGDTPELDGIR 353

Query: 439 VLAQHIMGCA 448
            +   +   A
Sbjct: 354 CVLDELQAAA 363