Pairwise Alignments

Query, 859 a.a., ATP-dependent helicase from Caulobacter crescentus NA1000

Subject, 1198 a.a., DEAD/DEAH box helicase domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 87.0 bits (214), Expect = 6e-21
 Identities = 115/416 (27%), Positives = 170/416 (40%), Gaps = 52/416 (12%)

Query: 25  HQLAMLDKARAGRGALLIAPTGGGKTLAGFLPSLIELAERPPRNTPAGVHTLYISPLKAL 84
           HQ    D  RAGR  ++  PT  GKT    LP L      P          LY+ PLKAL
Sbjct: 118 HQARATDLIRAGRHVVVATPTASGKTYVYNLPVLERFLSDP------DARALYLFPLKAL 171

Query: 85  AVDVERNLLTPIREMGLPIVAESRT----GDTGESRKARQKVRPPDILLTTPE--QLALF 138
           A D + +  T +     P  A  R     GDT +  + + +  PP +LLT PE   LA+ 
Sbjct: 172 AQD-QLSTFTGL-TAAWPDDARPRAAIYDGDTTDHFRRKIRQNPPTVLLTNPEMLHLAIL 229

Query: 139 CAWEGAREYFSDLRCVIIDEAHAIWPSKRGDLLALGLSRL----QQFAPNMRRVGLSATV 194
              +      + L  +++DE H  +    G  +A    RL     ++  +   V  SATV
Sbjct: 230 PHHQQWTSLLASLAFIVVDEVHT-YRGVLGAHMAQVFRRLLRVCARYGAHPTFVFCSATV 288

Query: 195 DDP------------DLVRKWL---GVNRVENP-PPRAGE--VSAEPTEGASTADLQL-A 235
            +P            DL  K L   GV+    P PP+     + A    G S  ++   +
Sbjct: 289 GNPGELAANLTGLGGDLENKNLVGEGVSFPHTPIPPKFSNEAIHAPHPTGISGHEVHADS 348

Query: 236 LSGPPGHLPRA--QGRICEPDIDLVLGAGGAQPVVE-VLVSGGRVPWAGHTAEHAMAEVY 292
             G  G  P     G     DI+++  +G  Q +   V V+    P     +  A+  + 
Sbjct: 349 AKGVKGARPPCGEAGGSASCDINVITESGAPQGLRHFVFVNPDDSP-----STAAIQLLR 403

Query: 293 DIIKAAKTALVFVNTRFQAEFAFQRLWELNDEGL---PIALHHGSLSAEQRRKVEAAMAR 349
             +      +V+  +R   E     +W     G     I+ +      E+RR +EA MA 
Sbjct: 404 AALARGLRTIVYCQSRRMTELI--SMWAAEKAGPYRDRISAYRAGFLPEERRDIEARMAG 461

Query: 350 GELRAVVCTSTLDMGIDWGDVDLVIQLAAPKGASRMVQRIGRANHRLDEPSRAIFV 405
           G+L AV+ TS L++GID G +DL I +  P      +QR GR   R  + S  I V
Sbjct: 462 GDLLAVISTSALELGIDIGGLDLCILVGYPGTVMSTLQRGGRVG-RAQQESAVILV 516