Pairwise Alignments

Query, 859 a.a., ATP-dependent helicase from Caulobacter crescentus NA1000

Subject, 807 a.a., DNA damage response helicase, ligase-associated (from data) from Dinoroseobacter shibae DFL-12

 Score =  709 bits (1831), Expect = 0.0
 Identities = 384/852 (45%), Positives = 519/852 (60%), Gaps = 56/852 (6%)

Query: 6   ALPPQFQAWFAKRGWTPRDHQLAMLDKARAGRGALLIAPTGGGKTLAGFLPSLIELAERP 65
           +LP +   W A +GW    HQ  ML +++     LLIAPTGGGKTLAGFLP+L EL   P
Sbjct: 8   SLPNEITRWIAAQGWALHPHQREMLARSQ-DPALLLIAPTGGGKTLAGFLPTLAELGPAP 66

Query: 66  PRNTPAGVHTLYISPLKALAVDVERNLLTPIREMGLPIVAESRTGDTGESRKARQKVRPP 125
           P     G+HTLYISPLKALA D++RNL  PI E GL I  E RTGDT ++++ RQ+  PP
Sbjct: 67  P----PGLHTLYISPLKALAADIKRNLRRPIEEAGLAIRVEDRTGDTSQTQRKRQRADPP 122

Query: 126 DILLTTPEQLALFCAWEGAREYFSDLRCVIIDEAHAIWPSKRGDLLALGLSRLQQFAPNM 185
            ILLTTPE LAL  ++E A   F+ ++ VI+DE HA+  SKRGD L LGL+RLQ   P +
Sbjct: 123 HILLTTPESLALMLSYEDAARTFAGVQRVIVDEIHALAESKRGDQLMLGLARLQSLVPGL 182

Query: 186 RRVGLSATVDDPDLVRKWLGVNRVENPPPRAGEVSAEPTEGASTADLQLALSGPPGHLPR 245
           RRVGLSATV+DP  + ++L      +P P                               
Sbjct: 183 RRVGLSATVEDPPAIARFL----ARHPDP------------------------------- 207

Query: 246 AQGRICEPDIDLVLGAGGAQPVVEVLVSGGRVPWAGHTAEHAMAEVYDIIKAAKTALVFV 305
                     D++L   G  P + +L +    PW+G    +A+  +   +KA KT L+F 
Sbjct: 208 ---------CDILLADPGPAPDITMLQTDEAPPWSGGGGRYAIPAILQAVKAHKTTLIFH 258

Query: 306 NTRFQAEFAFQRLWELNDEGLPIALHHGSLSAEQRRKVEAAMARGELRAVVCTSTLDMGI 365
           NTR QAE  F  LW  N++ LPI +HHGSLS EQR++VEAAMA G LRA+VCT +LD+GI
Sbjct: 259 NTRAQAELFFHALWLANEDALPIGIHHGSLSREQRQRVEAAMAEGALRAIVCTGSLDLGI 318

Query: 366 DWGDVDLVIQLAAPKGASRMVQRIGRANHRLDEPSRAIFVPASRFEMLECRAAADAILEN 425
           DWGDVDLVIQ+ APK   R+VQRIGRANHR + PS+A+ VPA+RFE++EC AA   + + 
Sbjct: 319 DWGDVDLVIQVGAPKNVKRLVQRIGRANHRYNAPSKALLVPANRFEVVECHAALKTMADG 378

Query: 426 HLDGEPPRTGALDVLAQHIMGCACSEPFKPTDLYDEVRSAGPYAELTWEDFEAVVDFVST 485
            LDGEP   G  DVL QHI+  A + PF    L+ EV SAG Y +LT   F+  ++F +T
Sbjct: 379 KLDGEPRAEGPRDVLCQHILAVAAAGPFDADALFAEVTSAGAYRDLTRPAFDDCLEFCAT 438

Query: 486 GGYALRTYDKFRRIVQIADGLRTARNAQARQQHRMNVGAIISPAMINIRIGGGRKPVGGR 545
           GGYALR YD+++R++   DG+   R+ +A +Q RMN+G II    + +R+   R   GG 
Sbjct: 439 GGYALRAYDRWQRLLHRPDGMWQLRDPRAARQIRMNIGTIIDTETLKVRLKNRR---GGT 495

Query: 546 KIGEAEEGYFEQLTPGDTFVFAGQVWRYNSLVGADAYVSPAPNDDPKMPSWGGSKFPLST 605
            +GE EEG+   LTPGDTF+  GQ+ RY  L      V+   +  PK+ ++ G+KF  ST
Sbjct: 496 PLGEVEEGFAATLTPGDTFLIGGQIVRYEGLNELTVEVTRRADKQPKIATFMGTKFATST 555

Query: 606 YLAERVRQMMHDEREWSALPGDVQEWLSWQKIRSAIPAEGEMLLETFPRGKRFHMVCYPF 665
            L+  + +M   + +W  LP    EWL  Q+  S +P    ML+ETF    R ++VCY F
Sbjct: 556 QLSHTILEMFR-QPDWPELPSATCEWLHLQRKVSKLPEADRMLMETFGHEDRQYLVCYGF 614

Query: 666 DGRLAHTTLAMLLTRRLDRLGVGPLGFVCNDYALNLWSLRPMDDLDLDELFAQDMLGDDL 725
            GR A  TL +LL++R++  G+ P+GFV  DYA  LW L  +   D   L   D L D  
Sbjct: 615 AGRNAQQTLGLLLSQRMELAGLAPIGFVATDYATMLWGLEEV--RDPAALVRPDGLRDSF 672

Query: 726 EAWLDESFMMKRSFKHCALIAGLIERRHPGAEKSGRQVTFSTDLIYDVLRKHQPDHLMLR 785
           E WL  + +MKR+F+  A+IAGLI+R  PG  K+GRQ TFS+D++YD L K+ PDH++++
Sbjct: 673 EQWLSGNAVMKRTFRAAAIIAGLIDRNTPGRRKTGRQATFSSDILYDTLLKYDPDHVLMQ 732

Query: 786 CARLDAATGLLDIARLGDMLTRVRGRIRHVALDRVSPFAVPMMLEIGRERAPGDAAGEMI 845
             R +A  GL+D  R+ ++L R  GR+ H  LDR+SP A P++LE G     G AA + +
Sbjct: 733 ITREEARRGLVDFGRIEELLARTTGRVDHRRLDRISPLAAPLLLERGTVPVAG-AAEDRL 791

Query: 846 LAEAEADLIAEA 857
           LA+A   L+ EA
Sbjct: 792 LAQAAEALMQEA 803