Pairwise Alignments

Query, 859 a.a., ATP-dependent helicase from Caulobacter crescentus NA1000

Subject, 871 a.a., ligase-associated DNA damage response DEXH box helicase from Ralstonia sp. UNC404CL21Col

 Score =  446 bits (1147), Expect = e-129
 Identities = 300/858 (34%), Positives = 433/858 (50%), Gaps = 64/858 (7%)

Query: 9   PQFQAWFAKRGWTPRDHQLAMLDKARAGRGALLIAPTGGGKTLAGFLPSLIELAERPPRN 68
           P   AWFA RGWTP   Q  +      G   LL A TG GKT A +L +L  LA+   R 
Sbjct: 7   PDLDAWFAARGWTPMPFQRTVWSAMARGESGLLHATTGAGKTYAVWLGALQRLAQVRGRG 66

Query: 69  TPAGVHTLYISPLKALAVDVERNLLTPIREMGLPIVAESRTGDTGESRKARQKVRPPDIL 128
               +  L+++P++ALA D  R L    + +        RTGDTG + +A Q  R P  L
Sbjct: 67  NAPPLSVLWLTPMRALAADTTRALTEAAQALAPHWTLGLRTGDTGSAERAAQSRRLPTAL 126

Query: 129 LTTPEQLALFCAWEGAREYFSDLRCVIIDEAHAIWPSKRGDLLALGLSRLQQFAPNMRRV 188
           +TTPE L+L  A   ARE    +  V++DE H +  +KRG  + L L+RL+ ++P++   
Sbjct: 127 VTTPESLSLLLARADAREALGSVHVVVVDEWHELVGNKRGVQVQLALARLRTWSPDLIVW 186

Query: 189 GLSATVDDPDLVRKWLGVNRVENPPPRAGEVSAEPTEGASTADLQLALSGPPGHLPRAQG 248
           GLSAT+ +                        AE  +    A      +   GHLP+   
Sbjct: 187 GLSATLGN-----------------------LAEAMDALGDAGTPAPGTLVQGHLPKRM- 222

Query: 249 RICEPDIDLVLGAGGAQPVVEVLVSGGRVPWAGHTAEHAMAEVYDIIKAAKTALVFVNTR 308
                +ID +L  G            GR PWAGH     +  V + +++A+TALVF+NTR
Sbjct: 223 -----EIDTLLPDGV-----------GRFPWAGHLGMAMLPHVLEELESARTALVFLNTR 266

Query: 309 FQAEFAFQRLWELNDE--GLPIALHHGSLSAEQRRKVEAAMARGELRAVVCTSTLDMGID 366
            QAE  +Q +     E  GL IALHHGSL    R  VE  + +G L+AV CTS+LD+G+D
Sbjct: 267 SQAELWYQAVINARPEWAGL-IALHHGSLDRATRDWVETGLKQGLLKAVFCTSSLDLGVD 325

Query: 367 WGDVDLVIQLAAPKGASRMVQRIGRANHRLDEPSRAIFVPASRFEMLECRAAADAILENH 426
           +  V+ V+Q+ +PKG +R++QR GR+ H    PSR   VP    E++E  AA  A +   
Sbjct: 326 FLPVERVLQIGSPKGVARLLQRAGRSGHAPGRPSRVTVVPTHSLELVEGAAARAAAMSGQ 385

Query: 427 LDGEPPRTGALDVLAQHIMGCACSEPFKPTDLYDEVRSAGPYAELTWEDFEAVVDFVSTG 486
           ++        LDVL QH++  A    F P  L +EVR A  Y +L  ++++  +DFV  G
Sbjct: 386 VEARTSPHKPLDVLVQHLVTVALGGGFVPNALLEEVRRAWAYRDLRDDEWQWALDFVRQG 445

Query: 487 GYALRTYDKFRRIVQIADGLRTARNAQARQQHRMNVGAIISPAMINIRIGGGRKPVGGRK 546
           G++L  Y  + R+V    G+    +A+  ++HRM++G I+S A + +R        GG  
Sbjct: 446 GHSLTAYPDYHRVVPDEHGVWRVPDARLARRHRMSIGTIVSDATMTVRWWHAS---GGGA 502

Query: 547 IGEAEEGYFEQLTPGDTFVFAGQVWRYNSLVGADAYVSPAPNDDPKMPSWGGSKFPLSTY 606
           +G  EEG+  +L PGD F+FAG++     +    AYV  A      +P W G + PLST 
Sbjct: 503 LGSIEEGFIARLHPGDNFLFAGRLLELVRVQDMTAYVRRATGKRAAVPRWNGGRMPLSTE 562

Query: 607 LAERVRQMM-------HDEREWSALPGDVQEWLSWQKIRSAIPAEGEMLLETFPRGKRFH 659
           LA  V   +        D  E  A     +  L  Q   SA+P    ++ ET    + +H
Sbjct: 563 LAHAVVAQLDAAAHARFDSPEMQA----ARPLLELQARWSALPTTATLVAETLQSREGWH 618

Query: 660 MVCYPFDGRLAHTTLAMLLTRRLDRLGVGPLGFVCNDYALNLWSLRPMD---DLDLDELF 716
           +  YPF GR AH  LA LL  R             NDY L L S  P+D    L   ELF
Sbjct: 619 LFLYPFAGRHAHLGLASLLGWRAANRTPATFSLAFNDYGLELLSATPIDWPALLASGELF 678

Query: 717 AQDMLGDDLEAWLDESFMMKRSFKHCALIAGLIERRHPGAEKSGRQVTFSTDLIYDVLRK 776
           A   L  D+ A L+   + +R F+  A ++GL+ + +PGA KS RQ+  S+ L Y+V R+
Sbjct: 679 ATHTLMQDVLASLNAGELAQRRFREIARVSGLVFQGYPGAHKSARQLQASSGLFYEVFRR 738

Query: 777 HQPDHLMLRCARLDAATGLLDIARLGDMLTRVRG-RIRHVALDRVSPFAVPMMLEIGRER 835
           H P +L+L  A  +     LD+ R+   L R+RG +++  AL R SPF  P+M+E  RE+
Sbjct: 739 HDPGNLLLSQAETEVLRQELDLDRIEAALIRMRGLQLQLCALKRPSPFGFPLMVERFREQ 798

Query: 836 APGDAAGEMI---LAEAE 850
              +   + I   LAEAE
Sbjct: 799 LSTEKLADRIARMLAEAE 816