Pairwise Alignments

Query, 859 a.a., ATP-dependent helicase from Caulobacter crescentus NA1000

Subject, 1504 a.a., ATP-dependent DNA helicase from Burkholderia phytofirmans PsJN

 Score =  243 bits (619), Expect = 8e-68
 Identities = 192/618 (31%), Positives = 274/618 (44%), Gaps = 84/618 (13%)

Query: 9   PQFQAWFAKRGWTPRDHQLAMLDKARAGRGALLIAPTGGGKTLAGFLPSLIELAERPPRN 68
           P   +WF K    P D Q A   + R GR  L+ APTG GKTL  FL +L +L ++   N
Sbjct: 55  PAVASWFLKTFPAPTDAQAAAWPQIRRGRSTLVAAPTGSGKTLTAFLSALDDLVQQGLTN 114

Query: 69  ---TPAGVHTLYISPLKALAVDVERNLLTPIREM-------GLP---IVAESRTGDTGES 115
               P     +Y+SPLKAL+ D+  NL  P++ +       GLP   I    RTGDT + 
Sbjct: 115 GGALPDETLVVYVSPLKALSNDIRLNLQIPLQGIAAELDARGLPPLDIRTAVRTGDTTQR 174

Query: 116 RKARQKVRPPDILLTTPEQLALFCAWEGAREYFSDLRCVIIDEAHAIWPSKRGDLLALGL 175
            +   K R P IL+TTPE L +    +  R   S +R VI+DE HA+   KRG  LAL L
Sbjct: 175 ERNALKKRAPHILVTTPESLYVLLGSDSGRRMLSTVRTVIVDEIHALAGGKRGSHLALSL 234

Query: 176 SRLQQFAPN-MRRVGLSATVDDPDLVRKWLGVNRVENPPPRAGEVSAEPTEGASTADLQL 234
            RL       + R+GLSAT      V ++L                     G  + D   
Sbjct: 235 ERLDALCQRRLPRIGLSATQKPVSAVARFL--------------------VGGGSID--- 271

Query: 235 ALSGPPGHLPRAQ-GRICEPDIDLVLGAGGAQPVVEVLVSGGRVPWAGHTAEHAMAEVYD 293
             SG P        G I E D+ L +                 VP        A   VYD
Sbjct: 272 --SGIPADCAIVDVGHIRERDLALEIPP---------------VPLEAVMPNEAWERVYD 314

Query: 294 ----IIKAAKTALVFVNTRFQAEFAFQRLWELNDEGLPIALHHGSLSAEQRRKVEAAMAR 349
               ++   +T L+FVNTR  AE A + L E   +   +A HHGSL+ E R   E  + R
Sbjct: 315 RLAELVAMHRTTLIFVNTRRMAERAARHLTERLGKDA-VAAHHGSLAKEHRFDAEQRLKR 373

Query: 350 GELRAVVCTSTLDMGIDWGDVDLVIQLAAPKGASRMVQRIGRANHRLDEPSRAIFVPASR 409
           GELR ++ T++L++GID GDVDLV Q+ +P+  +  +QR+GR+ H +    +    P SR
Sbjct: 374 GELRVLIATASLELGIDIGDVDLVCQMGSPRAIAPFLQRVGRSGHHVGGMPKGRLFPNSR 433

Query: 410 FEMLECRAAADAILENHLDGEPPRTGALDVLAQHIMGCACSEPFKPTDLYDEVRSAGPYA 469
            +++EC A  D +    LD        LDVLAQ I+    S  +    L++ +R A PYA
Sbjct: 434 DDLIECAALLDCVRRGELDALRIPRAPLDVLAQQIVAEVSSAEWNEDALFELMRRAAPYA 493

Query: 470 ELTWEDFEAVVDFVSTGGYALRTYDKFRRIVQ--IADGLRTARNAQ-------ARQQHRM 520
           +LT E ++AV+  ++  GY  R   +   + +  ++  LR  R  +              
Sbjct: 494 DLTREQYDAVLHMLAE-GYTSRNGPRAAYVHRDVVSGTLRGRRGGKLVAVTSGGTIPENA 552

Query: 521 NVGAIISPAMINIRIGGGRKPVGGRKIGEAEEGYFEQLTPGDTFVFAGQVWRYNSLVGAD 580
           +   ++ P  IN              IG   E +  +   GD F      +R   +    
Sbjct: 553 DYAVVLEPQAIN--------------IGTVNEDFAVESLAGDVFQLGNASYRILRIESGR 598

Query: 581 AYVSPAPNDDPKMPSWGG 598
             V  A    P +P W G
Sbjct: 599 VRVEDAQGQPPNIPFWLG 616