Pairwise Alignments

Query, 615 a.a., hypothetical protein from Caulobacter crescentus NA1000

Subject, 635 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  338 bits (867), Expect = 4e-97
 Identities = 208/559 (37%), Positives = 303/559 (54%), Gaps = 9/559 (1%)

Query: 56  PEMATTRGLDVGSRAGQR--SKLNDASRAGRNAWITARKERLAALARVAPERLSPEARID 113
           PE+AT  G+     AG+   SKL D S +G N    A K  L  L  +   +LS   ++ 
Sbjct: 63  PEIATYYGV-AEDEAGKDVLSKLTDYSPSGENHRRKALKAILTELNAIDASQLSASEQVS 121

Query: 114 LEVATYAYRRAVDGGVKYDFGEGQAGFGYAPYSPYVLSQLTGSYQTIPDFLDSRHPVRTS 173
           L         A+       +G     +G   + PYV++ L+G +   P +++ +  V T 
Sbjct: 122 LGSIKSEIAGALLPAETVAYGTMLGEYGVW-FLPYVVNHLSGLHVEFPGYMEDKFAVTTP 180

Query: 174 DDAEAYLSRLQAYAVALDANTEALALDVAKGVLAPDFALDAGLAQLRRQRAASAAEASIT 233
           + A+AYL+RL  Y  A+    + L  DV  GV+ PDF +D  +A L++Q    A E  + 
Sbjct: 181 EQAKAYLNRLTMYPAAMGTVIDKLDQDVQMGVIPPDFIIDKTIAVLQQQLVHHANEHPLV 240

Query: 234 RSIASRAAKAGLAGDWA--GRAAAIVSAAVHPALDRQIAALEAARAKAKGDAGVWKLPDG 291
            S  ++   A +    A    AA +V    +PA  + I+AL+A R KA   AG+   P G
Sbjct: 241 SSFKAKLTAAQVPESEALVNSAAELVETKYYPATRQLISALQAVRLKATHVAGLGHQPQG 300

Query: 292 DAFYADALAFQTTTRRTPDEVHRLGLEQVAELEAQIDARLRRLGLTDGTVAQRLTALSAR 351
              Y   +     +  TPDE+H+LGL++VA +  ++D  L+++G   GTV +R+  L   
Sbjct: 301 AKLYKAMIKHLANSEMTPDEIHQLGLDEVARITTEMDVLLKQVGYRKGTVGERMQRLLKD 360

Query: 352 ADQQYANTDAGRAQLLADLNAQTAAIRARMGTVFKTLPAAPVEIVRVPPEIEDGAPNGYA 411
               Y NT  G+ QL+ D++     + A++   F  LP   V +  VP          + 
Sbjct: 361 PKYIYPNTAEGKQQLMTDIHGYLTKVNAKLPLWFGLLPNQEVAVEAVPDSRAAATSGAFY 420

Query: 412 QAPALDGSRPGRFYINLKDTAEWPKFNLPTLTYHEALPGHVWQGSIALGSQQIPMLRRAG 471
            AP+ DGSR G F+I+L D A  P ++L TLTYHE  PGH  Q  I L S  +P+L    
Sbjct: 421 DAPSQDGSRKGTFWISLYDMAALPSYSLQTLTYHETNPGHHLQTLIGL-SDTLPLLSTIF 479

Query: 472 MGFAAYGEGWALYAEQLAAEMGVYEGDPLGEIGYLQSLQFRAVRLVVDTGLHFKRWSRAQ 531
              AA GEGWALYAE+LAAEMG+Y+ +P+ ++G LQS   RAVRLVVDTG+H K WSR +
Sbjct: 480 YSNAA-GEGWALYAERLAAEMGMYQDNPINDLGRLQSELHRAVRLVVDTGMHAKDWSREK 538

Query: 532 ATDYMVSQTGMPRARVQREIDRYCIWPGQACSYKIGHVEWVRLREQAQKRADASFDLKTF 591
           A DY V+  G+  +    EI+RY +WPGQA  YK+G ++ + LR +A+K     FD+K F
Sbjct: 539 AIDYAVATEGIHLSEATGEIERYVVWPGQALGYKLGELKIIELRTKAKKALGDKFDIKVF 598

Query: 592 HDVLLQ-GPMPLVVLEQTL 609
           HD LL+ G +PL +LEQ +
Sbjct: 599 HDRLLENGALPLDLLEQKM 617