Pairwise Alignments

Query, 262 a.a., exodeoxyribonuclease III from Caulobacter crescentus NA1000

Subject, 257 a.a., exodeoxyribonuclease III protein from Sinorhizobium meliloti 1021

 Score =  214 bits (544), Expect = 2e-60
 Identities = 116/258 (44%), Positives = 156/258 (60%), Gaps = 9/258 (3%)

Query: 1   MRIATWNVNSINARLEGVLAWFESEAPDVAVLQEIKCVDEKFPTEAFERLGYNVAVHGQK 60
           M+IAT+N+N +N RL+ +L W  +  PDV  LQE+K  D +FP  A E  GY     GQ 
Sbjct: 1   MKIATFNINGVNKRLDILLTWLGTAEPDVVCLQELKATDGQFPRAAIEAAGYGAVWRGQA 60

Query: 61  TYNGVALLSK--HPIEDVRKGLPFLSEDEVDEQARYIEAVIAAPTPFRVVGIYLPNGNPI 118
            +NGVA+L++   P+   R GLP    D  D Q+RYIEA +       +  +Y PNGNP 
Sbjct: 61  AWNGVAILARDREPVL-TRTGLP---GDSSDTQSRYIEAAVNG---ILIASLYAPNGNPQ 113

Query: 119 GTEKFAYKLSWMRRLHAHAQGLLAFEEPLVIAGDYNVIPEVEDVANPQAWLGDALFQPES 178
              KF YKL+W  R + HA  LL    P+V+AGDYNV+PE  D+   +++  +AL QPES
Sbjct: 114 PGPKFDYKLAWHLRFNQHAAALLETGVPVVLAGDYNVVPEPRDIYPTRSYDDNALVQPES 173

Query: 179 RAAFRALKNLGFADAYMQADGAPGGYTFWDYQAGAWQRNLGIRIDHLLLSPQAADRLTGL 238
           RAAFR+L + G+ DA  +       +TFWDY+   WQR+ G+R+DH+LLS +   RLTG 
Sbjct: 174 RAAFRSLVDQGWLDALRKIHPKEELFTFWDYRRNRWQRDAGLRLDHILLSRKLRRRLTGA 233

Query: 239 VIHRDERDKEKPSDHVPV 256
            I R+ R  E  SDH PV
Sbjct: 234 GIDREIRALEGSSDHAPV 251