Pairwise Alignments

Query, 262 a.a., exodeoxyribonuclease III from Caulobacter crescentus NA1000

Subject, 269 a.a., exonuclease III (RefSeq) from Shewanella loihica PV-4

 Score =  142 bits (357), Expect = 1e-38
 Identities = 95/271 (35%), Positives = 138/271 (50%), Gaps = 13/271 (4%)

Query: 1   MRIATWNVNSINARLEGVLAWFESEAPDVAVLQEIKCVDEKFPTEAFERLGYNVAVHGQK 60
           M+I ++N+N + ARL  + A  +S +PD+  LQE K  DE FP    E +GY V  HG K
Sbjct: 1   MKIVSFNINGLRARLHQLQALIDSHSPDIIGLQETKVHDEAFPLAEVEAMGYQVHYHGGK 60

Query: 61  TYNGVALLSKHPIEDVRKGLPFLSEDEVDEQARYIEAVI--AAPTPFRVVGIYLPNGNPI 118
            + GVA+LSK P   V+KG P    D+ + Q R I      A      V+  Y P G  I
Sbjct: 61  AHYGVAMLSKLPPVKVQKGFP---TDDDEAQRRMIMGTFTQANGRQLTVLNGYFPQGENI 117

Query: 119 GTE-KFAYKLSWMRRLHAHAQGLLAFEEPLVIAGDYNVIPEVEDV----ANPQAWL--GD 171
             E K+  K  + + L  + Q   + +E + I GD N+ P   D+     N + WL  G 
Sbjct: 118 SHETKYPAKRKFYQDLMHYLQQHHSPDEDIAIIGDINISPIDLDIGIGEVNAKRWLKTGK 177

Query: 172 ALFQPESRAAFRALKNLGFADAYMQADGAPG-GYTFWDYQAGAWQRNLGIRIDHLLLSPQ 230
             FQPE R   + L + G  D + Q        Y+++DY++  +  N G+RID +L +P 
Sbjct: 178 CSFQPEEREWLQTLLDWGLVDTFRQLHPTRSERYSWFDYRSKGFDDNRGLRIDVILATPS 237

Query: 231 AADRLTGLVIHRDERDKEKPSDHVPVVGRFR 261
            A+RLT   +  D R  +KPSDH P+   F+
Sbjct: 238 LAERLTESDVDYDLRGIDKPSDHAPIWSCFK 268