Pairwise Alignments

Query, 262 a.a., exodeoxyribonuclease III from Caulobacter crescentus NA1000

Subject, 249 a.a., exodeoxyribonuclease III from Methanococcus maripaludis S2

 Score = 99.8 bits (247), Expect = 5e-26
 Identities = 75/258 (29%), Positives = 121/258 (46%), Gaps = 16/258 (6%)

Query: 1   MRIATWNVNSINARLE-GVLAWFESEAPDVAVLQEIKCVDEKFPTEAFERLGY-NVAVHG 58
           M++ +WNVN I A L+ G + + E E+PD+  +QE K    +          Y N A   
Sbjct: 1   MKMLSWNVNGIRACLKNGFMNFLERESPDIMCIQETKVQSGQVQLGLDGYFQYWNYAE-- 58

Query: 59  QKTYNGVALLSKHPIEDVRKGLPFLSEDEVDEQARYIEAVIAAPTPFRVVGIYLPNGNPI 118
           +K Y+G A+ +K    +V  G+      E + + R I         + +V +Y PN    
Sbjct: 59  RKGYSGTAIFTKIKPNNVILGM---ENSEHNNEGRVITLEF---DEYYLVNVYTPNSQR- 111

Query: 119 GTEKFAYKLSWMRRLHAHAQGLLAFEEPLVIAGDYNVIPEVEDVANPQAWLGDALFQPES 178
           G  +  Y+  W     ++ +  L  ++P+V  GD NV  +  D+ NP+  + +A F PE 
Sbjct: 112 GLTRLEYRQKWDEDFLSYIK-TLETKKPVVFCGDLNVAHKEIDLKNPKTNVKNAGFTPEE 170

Query: 179 RAAFRALKNLGFADAYMQADGAPGGYTFWDYQAGAWQRNLGIRIDHLLLSPQAADRLTGL 238
           R  F  + N GF D + + +  P  Y++W Y+  A  RN+G RID+  +S    + L   
Sbjct: 171 RNGFDNIVNSGFLDTFREFNNEPDNYSWWSYRFNARARNIGWRIDYFCISKSLRNNLKDA 230

Query: 239 VIHRDERDKEKPSDHVPV 256
            I      +   SDH PV
Sbjct: 231 YI----MPEVMGSDHCPV 244