Pairwise Alignments

Query, 228 a.a., NADH-quinone oxidoreductase chain E from Caulobacter crescentus NA1000

Subject, 208 a.a., NADH dehydrogenase (ubiquinone) (NCBI) from Rhodospirillum rubrum S1H

 Score =  164 bits (415), Expect = 1e-45
 Identities = 88/196 (44%), Positives = 124/196 (63%), Gaps = 2/196 (1%)

Query: 1   MSVRRLAKEQPASFAFSKDSQAKADWWKAKYPAERKQSAVIPMLWLAQKQEGWISEPAIQ 60
           MS    A EQPA+FAF+ ++  KA    AKYP  R++S V+P+L LAQ+Q+GW+S  AI+
Sbjct: 1   MSGNGAAGEQPATFAFTPENLEKAQAILAKYPKGRERSGVLPLLDLAQRQQGWVSHAAIE 60

Query: 61  EIAKQLEMPVIRVLEVATFYVMFQLQPVGKVAFVQLCGTTPCQLRGALDLRKVLEDKIG- 119
           E+ +    P +RVLEVATFY M++L P G+   +++C   PC LRG+ ++ + + D++G 
Sbjct: 61  EVGRLTGTPRMRVLEVATFYTMYKLSPKGR-HHIEVCTNLPCWLRGSDEILRAVRDELGI 119

Query: 120 PAHHVSADGKFSWEEVECLGACCNAPMAAINDYYYEDLTPESLAKILDDFAAGKAPKPGS 179
                + DG FS  E ECLGAC NAPM  I D YYEDLT ES+ +++     G+   PGS
Sbjct: 120 EVGGETDDGLFSLAEAECLGACVNAPMLQIGDDYYEDLTYESVRELVRKLKVGEPVTPGS 179

Query: 180 YEGRGASEPKGAIHTL 195
             GR  + P+G   TL
Sbjct: 180 QSGRQGACPEGGPTTL 195