Pairwise Alignments

Query, 228 a.a., NADH-quinone oxidoreductase chain E from Caulobacter crescentus NA1000

Subject, 402 a.a., NADH-quinone oxidoreductase, E subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  234 bits (597), Expect = 2e-66
 Identities = 116/196 (59%), Positives = 144/196 (73%), Gaps = 1/196 (0%)

Query: 3   VRRLAKEQPASFAFSKDSQAKADWWKAKYPAERKQSAVIPMLWLAQKQEGWISEPAIQEI 62
           +RRL  EQPA FAF+ +++A A     K+P  R+ SA+IP+LW AQ+QEGW+S+PAI+ +
Sbjct: 2   LRRLHAEQPADFAFTPENEAWALTQMTKFPEGRQASAIIPILWRAQEQEGWLSKPAIEYV 61

Query: 63  AKQLEMPVIRVLEVATFYVMFQLQPVGKVAFVQLCGTTPCQLRGALDLRKVLEDKIGP-A 121
           A  L+MP IR LEVATFY MFQLQPVG VA +Q+CGTT C + GA DL  V ++KI P A
Sbjct: 62  ADMLDMPYIRALEVATFYFMFQLQPVGSVAHIQICGTTSCMICGAEDLVAVCKEKIAPRA 121

Query: 122 HHVSADGKFSWEEVECLGACCNAPMAAINDYYYEDLTPESLAKILDDFAAGKAPKPGSYE 181
           H +SADGKFSWEEVECLG+C NAPMA I   YYEDLT ES + +LD  AAG+ P PG   
Sbjct: 122 HQLSADGKFSWEEVECLGSCANAPMAQIGKDYYEDLTVESFSALLDRMAAGEVPVPGPQN 181

Query: 182 GRGASEPKGAIHTLTD 197
           GR  SEP G + +LT+
Sbjct: 182 GRYTSEPAGGLTSLTE 197