Pairwise Alignments

Query, 654 a.a., peptidyl-prolyl cis-trans isomerase from Caulobacter crescentus NA1000

Subject, 656 a.a., Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) from Xanthomonas campestris pv. campestris strain 8004

 Score =  131 bits (329), Expect = 1e-34
 Identities = 141/579 (24%), Positives = 234/579 (40%), Gaps = 65/579 (11%)

Query: 1   MLAGFRKFAKSPFAVVLFGLLIVSFAIFGISDVFKGPQGSGVI-----------SAGS-- 47
           ML   R       A  + GLL++ F +F I + + G  G+  +           SA S  
Sbjct: 1   MLQKLRDKTSGWIATAILGLLMIPF-LFVIDNSYLGGIGANNVAKVQAPPTWWKSAPSWW 59

Query: 48  --------RSMSAIDFKQRFDNYRKAMEQQNGTTLTPDQAVEQGVDRQIVQELVLQESLA 99
                     +S  DF+ RF+  R    Q+ G    P Q   +    Q++ +LV ++ + 
Sbjct: 60  PVSLLWQHHEISTQDFRARFEQSRMQERQRQGENFDPRQFESRENKLQVLDQLVDEQVVR 119

Query: 100 AALHKMGVAPSDKLVADTVHEQMSQLPPTTRPFDPITGKFDSRAYATLMQQNG--LTPET 157
                 G+   D  V D +            P   I GKF    Y   + Q     TP  
Sbjct: 120 LGAEDAGIVIGDATVRDYI---------ANIPAFQIDGKFSPDQYRAALAQGTPPRTPAQ 170

Query: 158 YEASLRDEIAQTHFFSAIADGLKAPRIYAALQGAYLLEAREVSAFVVNPSTVQRPNPPTD 217
           ++A +RD + Q+    A+A+   A +         + E R+V   ++ P       P +D
Sbjct: 171 FDALVRDSLQQSVIPQAVAESGFATKSEFERLLTLMGETRDVELAML-PEPTADTAPVSD 229

Query: 218 AQLTAFMKENADRLTRPETRVLSIMRVSATALEPSVTINPADVQKAFDFRKDSLARPETR 277
           AQ+  +   +     +PET  +  + ++A  L P+   + A ++K ++  K     P+ R
Sbjct: 230 AQIKQWYDGHPQDFRQPETVTIEYVELNAATLPPATAADEATLRKRYEEEKARFVEPDQR 289

Query: 278 TIVQIA-----------APDAKAAAVISQRLGKGEDPAAVAKAYGKTP--------LVLT 318
               I            A + KAA + +Q    G D AA+AKA  + P        L   
Sbjct: 290 LASHILISAGSDAAAQKAGEEKAAKLAAQAKQPGADFAALAKANSQDPGSKDAGGDLGWV 349

Query: 319 DKPKSAVPDRKVADAAFALQTGQVSGPIIGDLGVAVVKVTKITPGAVATLDSVRPQIEAE 378
           +K     P     DA FA++ G V GPI  + G  V+++ ++  G   + + VR Q+ AE
Sbjct: 350 EKGTMVKP---FEDALFAMKAGDVVGPIKTEFGYHVIQLREVKGGQGKSFEQVRDQLAAE 406

Query: 379 -VRSQTAQAKAYEQTQTYQDARDAGADLISAASKAGALVITTAPVTAQGTDQMGQPFAGL 437
            +++   +A A    +           L  AA + G  V T  P +   TD  G      
Sbjct: 407 QLKADADKAFADLSGKLVDQVYKNPTALEPAAKQVGLPVQTLGPFSR--TDASG---IAA 461

Query: 438 TPDIIKTAFD---LSQGGESELVEAGKGEYYAVKVERIVPAALPPLAEVKPQLTAVWFGQ 494
            P ++++AF    +  G  S+ +         ++V         PL +V+ ++ A     
Sbjct: 462 NPAVLRSAFSETLVQDGTVSDPITIAPNHSVVLRVTNHTAEQTLPLDKVREKVIAAVHAD 521

Query: 495 EMAKRMKAKADELAARVKKGESLEAVATAAQSNVQKIPG 533
              K   A AD L ARV+KGE+L+++A A +  V  IPG
Sbjct: 522 RTKKSAVAAADALLARVQKGETLQSLAAAEKLQVTPIPG 560