Pairwise Alignments

Query, 654 a.a., peptidyl-prolyl cis-trans isomerase from Caulobacter crescentus NA1000

Subject, 615 a.a., peptidyl-prolyl cis-trans isomerase D (RefSeq) from Shewanella amazonensis SB2B

 Score =  143 bits (361), Expect = 2e-38
 Identities = 146/621 (23%), Positives = 243/621 (39%), Gaps = 58/621 (9%)

Query: 1   MLAGFRKFAKSPFAVVLFGLLIVSFAIFGISDVFKGPQGSGVISAGSRSMSAIDFKQRFD 60
           ML   R+ A+   A  +  L+I+SFA  G+S            +     +     +Q F 
Sbjct: 1   MLEKIREGAQGTIAKSILVLVILSFAFTGVSSYLGSSTEPAAATVNGEEIPVSALEQAFQ 60

Query: 61  NYRKAMEQQNGT---TLTPDQAVEQGVDRQIVQELVLQESLAAALHKMGVAPSDKLVADT 117
           N +  MEQQ G    TL  D    + + + +++ ++  + L     +MG+  SD+ +   
Sbjct: 61  NEKARMEQQLGEMFQTLAADDNYLRSIRQGVLERMIADKLLDQTASEMGLRISDEQIKQA 120

Query: 118 VHEQMSQLPPTTRPFDPITGKFDSRAYATLMQQNGLTPETYEASLRDEIAQTHFFSAIAD 177
           + E+         P     GKFD+  Y  +++Q G    ++   +R ++ +    +A+  
Sbjct: 121 IMEE---------PAFQTEGKFDNERYLAILRQLGYQTNSFRDMMRVDMTRRQLVNALIG 171

Query: 178 GL----KAPRIYAALQGAYLLEAREVSAFVVNPSTVQRPNPPTDAQLTAFMKENADRLTR 233
                    +  A LQG    + R++   VV     +      D +  +F   N D+  +
Sbjct: 172 SEFVLPSESKAVAELQG----QTRDLRYLVVESQPFEAGITVADDEAKSFYDANPDQFIK 227

Query: 234 PETRVLSIMRVSATALEPSVTINPADVQKAFDFRKDSLARPETRTIVQI--------AAP 285
           PE   L  + +SA +L   V++     +  +D        PE R    I        AA 
Sbjct: 228 PEQVSLEYLTLSAKSLADEVSVTDEQAKAYYDEHMSQYKTPEKRLAAHILVNLGDDEAAA 287

Query: 286 DAKAAAVISQRLGKGEDPAAVAKAYGKTPLV-----LTDKPKSAVPDRKVADAAFALQTG 340
             KA A+ + +L  G D A +AK   +           D  +  V D    +A F L+  
Sbjct: 288 KTKADAIYA-KLQAGADFAELAKTDSEDTFSGELGGQLDWFEQGVMDPAFDEALFGLEKD 346

Query: 341 QVSGPIIGDLGVAVVKVTKITPGAVATLDSVRPQIEAEVRSQTAQAKAYEQTQTYQDARD 400
           Q S  +  D G  ++K+  +  GA A+ D V+ +I A+++ + A  K Y   Q   D   
Sbjct: 347 QYSAVVKTDYGFHIIKLLDVQGGAQASFDEVKDRIFAQIKEKDALDKFYSLQQKLADTSY 406

Query: 401 AGADLISAASKAGALVITTAPVTAQGTDQMGQPFAGLTPDIIKTAFD---LSQGGESELV 457
              D ++ A+KA  L + +  + A+       P     P +IK AF    L  G  S++V
Sbjct: 407 EVPDSLTEAAKATGLEVKSTGLFAREM----PPAEISNPALIKAAFSEQVLLSGMNSDVV 462

Query: 458 EAGKGEYYAVKVERIVPAALPPLAEVKPQLTAVWFGQEMAKRMKAKADELAARVKKGESL 517
           + G  +   V+V+    A   P  EVK  + A     +     K +A EL A+ K GE+L
Sbjct: 463 DLGDNQVAVVRVKEHKQAGTLPFDEVKAGIVARLTQDKANDAAKLQAQELLAKFKAGEAL 522

Query: 518 EAVATAAQSNVQKIPGGLTRQNAQQHVALGQEFLGAAFTAKPGAVFTARAGQQGQAYVVA 577
           E  A A  +   +               L    +   F    G   T         Y + 
Sbjct: 523 ELTAKAKVARFDR--------------ELDPSIVNKGFQLAVGGADTI---SMASGYALV 565

Query: 578 KLDAVRAAPTANVAQIAVLAQ 598
            LD V  A     A +  LAQ
Sbjct: 566 VLDKVNPAEGVEDALVQALAQ 586