Pairwise Alignments

Query, 654 a.a., peptidyl-prolyl cis-trans isomerase from Caulobacter crescentus NA1000

Subject, 626 a.a., peptidylprolyl isomerase from Rahnella sp. WP5

 Score =  142 bits (359), Expect = 3e-38
 Identities = 138/621 (22%), Positives = 250/621 (40%), Gaps = 38/621 (6%)

Query: 1   MLAGFRKFAKSPFAVVLFGLLIVSFAIFGISDVFKGPQGSGVISAGSRSMSAIDFKQRFD 60
           M+   R  A      ++  L+I+SF + G+ +   G  G        + +     +Q   
Sbjct: 1   MMDNLRAAANHVVLKIILALIILSFILTGVGNYLIGGSGDYAAKVNGQEIGRAQLEQAVQ 60

Query: 61  NYRKAMEQQNG---TTLTPDQAVEQGVDRQIVQELVLQESLAAALHKMGVAPSDKLVADT 117
           N R  ++QQ G   + L       Q + ++ +  L+    L     K+G+  SD+ + D 
Sbjct: 61  NQRSRLQQQLGDQFSALAGSDGYMQQLRQESLSNLIDVTLLDQYSKKLGITVSDQQIKDA 120

Query: 118 VHEQMSQLPPTTRPFDPITGKFDSRAYATLMQQNGLTPETYEASLRDEIAQTHFFSAIAD 177
           +            P     G+FD+  Y   +Q  G T + +   ++ ++       A   
Sbjct: 121 IF---------ATPQFQTDGRFDNAKYLQSIQGMGYTADNFAQLMKQQLISQQLEQAYGQ 171

Query: 178 GLKAPRIYAALQGAYLLEAREVSAFVVNPSTVQRPNPPTDAQLTAFMKENADRLTRPETR 237
                 + +   G  +L++R+V    ++   +      TDA+L AF  +N +    PE  
Sbjct: 172 SDFVLPVESKSLGGLILQSRDVQTATLDTDALAAKQQVTDAELQAFYDQNKNSFLSPEQV 231

Query: 238 VLSIMRVSATALEPSVTINPADVQKAFDFRKDSLARPETRTIVQIAAPDAKAAAVISQRL 297
            +S + + A A++    +  AD+   +D  K    +PE R    I       A  ++  L
Sbjct: 232 KVSYIEMDAAAMQGKTNVTDADISAYYDQHKSEFGQPERRRYSVIVLKSQADADAVAAEL 291

Query: 298 GKGEDPAAVAKAYGKTPLVLTD-------KPKSAVPDRKVADAAFALQTGQVSGPIIGDL 350
            KG D A +AK      L           +P++ +P+ K A+       GQVSG I  D 
Sbjct: 292 KKGTDFAELAKTKSTDALSARQGGDLGWMEPETTLPEFKNANLT---TKGQVSGVIKSDS 348

Query: 351 GVAVVKVTKITPGAVATLDSVRPQIEAEVRSQTAQAKAYE-QTQTYQDARDAGADLISAA 409
           G  ++++  +TP  V  L  VR  I  +++ + +    Y  Q +  + A +    L SA 
Sbjct: 349 GFFILRLDDVTPEQVKPLADVRNTIADKLKQEKSLDAYYALQQKVSEAATNDNESLASAE 408

Query: 410 SKAGALVITTAPVTAQGTDQMGQPFAGLTPDIIKTAF---DLSQGGESELVEAGKGEYYA 466
             AG   + T   T Q     G  F  +   I        D S G  S+++       + 
Sbjct: 409 DVAGTKAVHTDWFT-QNQIPAGINFKPVVQAIFDGGLIGQDGSPGSNSDIITVDGDRAFV 467

Query: 467 VKVERIVPAALPPLAEVKPQLTAVWFGQEMAKRMKAKADELAARVKKGESLEAVATAAQS 526
           V+V+      + P A+VK Q+T +   Q+   + + + ++L   +K+G+  +A+  A  +
Sbjct: 468 VRVDAHKAEGVKPFADVKDQVTTLVKRQKAQDQARMEGEKLLTALKEGKGDDAMKAAGLT 527

Query: 527 --NVQKIPGGLTRQNAQQHVALGQEFLGAAFTAKPGAVFTARAGQQGQAYVVAKLDAVR- 583
              VQK+      Q +QQ  A  +         K   V+      +G + V+ KL+AV  
Sbjct: 528 FGAVQKV------QRSQQPSAFEENVYALPHPQKDQPVYGLTQDDKGNS-VLVKLNAVTP 580

Query: 584 -AAPTANVAQIAVLAQGQAAN 603
              P A+ A+     Q  ++N
Sbjct: 581 GTIPAADTARFNQEMQQTSSN 601