Pairwise Alignments

Query, 654 a.a., peptidyl-prolyl cis-trans isomerase from Caulobacter crescentus NA1000

Subject, 614 a.a., putative peptidyl-prolyl cis-trans isomerse D (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  186 bits (472), Expect = 3e-51
 Identities = 146/531 (27%), Positives = 242/531 (45%), Gaps = 28/531 (5%)

Query: 13  FAVVLFGLLIVSFAIFGISDVFKGPQGSGVISAGSRSMSAIDFKQRFDNYRKAMEQQNGT 72
           F  +L GLLIV+ A FGIS    G   + V S G   ++  ++ +      +A  QQ G 
Sbjct: 9   FMFILLGLLIVALAGFGISSF--GGSNARVGSVGDTDITVDEYARALQTQLRAAGQQRGR 66

Query: 73  TLTPDQAVEQGVDRQIVQELVLQESLAAALHKMGVAPSDKLVADTVHEQMSQLPPTTRPF 132
            ++  +A E G+DRQ++ +LV   ++     K+GV+  D  VA    EQ+  +P     F
Sbjct: 67  AVSMAEARELGLDRQVLAQLVNTAAIDNEAAKLGVSVGDMRVA----EQIQTIPA----F 118

Query: 133 DPITGKFDSRAYATLMQQNGLTPETYEASLRDEIAQTHFFSAIADGLKAPRIYAALQGAY 192
             I G FD  AY   +QQN L+PE +EA +R+E A+    +A+  GL+AP+ Y      +
Sbjct: 119 SGIGGGFDREAYEFTLQQNNLSPEEFEADVRNEAARNLLQAAVIGGLRAPQAYTGTLYDF 178

Query: 193 LLEAREVSAFVVNPSTVQRPNP-PTDAQLTAFMKENADRLTRPETRVLSIMRVSATALEP 251
           +   R+ +   + P  V      PTDA+L AF   N    T PETR ++ + +S   ++ 
Sbjct: 179 IAARRDFTWAEITPDLVALTQAMPTDAELRAFYDANPAAFTAPETREITYVLLSPEMMQD 238

Query: 252 SVTINPADVQKAFDFRKDSLARPETRTIVQIAAPDAKAAAVISQRLGKGEDPAAVAKAYG 311
            V+ +  D++ A+D       +PE R + ++       AA     L  G    +  +   
Sbjct: 239 QVSPSEEDLRAAYDRAASVYVQPERRLLDRVVFGTEAQAAEAKAALDSGAQ--SFEELLA 296

Query: 312 KTPLVLTDKPKSAVP----DRKVADAAFALQTGQVSGPIIGDLGVAVVKVTKITPGAVAT 367
              L L D     V     D  VA+  F  Q   + GP+   LG A+ ++       V T
Sbjct: 297 ARDLSLEDVDLGEVARDDLDDAVAEVVFGDQETGIVGPVRTALGPALFRINAALAAQVTT 356

Query: 368 LDSVRPQIEAEVRSQTAQAKAYEQTQTYQDARDAGADLISAASKAGALVITTAPVTAQGT 427
            +  R ++ A +    A+    ++ +   D    GA L   A+   A  +    +TA  T
Sbjct: 357 FEEARDELTAALAGDAARRAVADEIEALDDLLAGGATLEELAADTPA-ELGELSLTATTT 415

Query: 428 DQMGQPFAGLTPDIIKTAFDLSQGGESELVEAGKGEYYAVKVERIVPAALPPLAEVKPQL 487
           + +        P++   A  LS+G   E+     G  +A++++ +VP  L P  EV+  +
Sbjct: 416 EGI-----AAYPEVRALANTLSEGDFPEIETLDDGGVFALRLDEVVPPRLLPFDEVREDV 470

Query: 488 TAVWFGQEMAKRMKAKADELAARVKKGESLEAVATAAQSNVQKIPGGLTRQ 538
            A W  Q +   + A+A  +A  ++ GES      A Q   +++  GLTR+
Sbjct: 471 VAGWEAQRLQDALSAEAARVAEALRGGESF-----ADQGLERQVETGLTRE 516