Pairwise Alignments

Query, 1207 a.a., urea carboxylase from Caulobacter crescentus NA1000

Subject, 667 a.a., 3-methylcrotonyl-CoA carboxylase subunit alpha from Azospirillum brasilense Sp245

 Score =  422 bits (1085), Expect = e-122
 Identities = 231/444 (52%), Positives = 294/444 (66%), Gaps = 6/444 (1%)

Query: 1   MFDKVLIANRGAIACRIIRTLRAMGVKSVAVFSDADAGSLHVSMADEAVRLGPAPAAESY 60
           MFDK+LIANRG IACR+IRT R MG+++VAV+S+ADA ++HV MADEAV +GPAP  ESY
Sbjct: 1   MFDKILIANRGEIACRVIRTARRMGIRTVAVYSEADARAMHVEMADEAVCIGPAPVGESY 60

Query: 61  LRADLVLAAAQATGAQAIHPGYGFLSESAAFAQACEDAGVTFIGPSADNIRAFGLKHTAR 120
           LR D +L  A+ TGAQAIHPGYGFLSE+A FA AC +AGV FIGP  + IR  G K  ++
Sbjct: 61  LRGDAILEVAKRTGAQAIHPGYGFLSENAGFAAACAEAGVVFIGPPIEAIRVMGSKAESK 120

Query: 121 DLAQAHGVPLAPGTDLLTDPAAALAA-AQRIGFPVILKATAGGGGIGMRVCESAEAVEEA 179
            +     VPL PG          L+A A+RIG+PV++KA+AGGGG GMRV  +A    +A
Sbjct: 121 RVMSQADVPLVPGFHGEAQDLETLSAEAERIGYPVLVKASAGGGGKGMRVVRAAGEFADA 180

Query: 180 FAAVRRLATGNFSDGGVFLERYVHKARHIEVQVFGDGAGRVAALGERDCSLQRRNQKVVE 239
            A  +R A   F D  V LE+Y+ + RH+E+QVF D  G    L ERDCS+QRR+QKV+E
Sbjct: 181 VAGAKREAKAAFGDDSVLLEKYLGRPRHVEIQVFCDTHGNGVYLFERDCSIQRRHQKVIE 240

Query: 240 ETPAPGLPAATRTALLDAAVRLAKAANYRSAGTVEFLYDADRDDFFFLEVNTRLQVEHGV 299
           E PAP LP   R  + +AAV  AKA NY  AGTVEFLY  +   F+F+E+NTRLQVEH V
Sbjct: 241 EAPAPALPDDLRRRMGEAAVAAAKAVNYVGAGTVEFLY--EDGGFYFIEMNTRLQVEHPV 298

Query: 300 TEQVTGVDLVEWMVRGAAGDFSFLDTPPPAPRGAAIQVRLYAEDPAQDYRPSAGVLTEVA 359
           TE++TG DLVEW +R AAG    L       RG A + RLYAEDP +++ P+ G L  + 
Sbjct: 299 TEKITGQDLVEWQLRVAAGGVLPLMQDQLTRRGHAFEARLYAEDPQREFLPAIGKLVRLR 358

Query: 360 FP---EGVRADGWVVDGTEVSAFYDPMLAKLIVIAEHRPAAVAALQAALDATRLAGIETN 416
            P   E VR D  V +G EV+ FYDPM+AKLIV  E R AA+  L+ AL A  + G+ TN
Sbjct: 359 PPAENEHVRVDTGVREGDEVTMFYDPMIAKLIVWDEDRDAALRRLRVALAAYEVVGVTTN 418

Query: 417 LDWLRTVTRSQPFVSGEVSTRALE 440
           + +L  +     F + E+ T  +E
Sbjct: 419 VAFLGAIAGHPAFRAVEIDTGFIE 442



 Score = 67.0 bits (162), Expect = 5e-15
 Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 1/86 (1%)

Query: 1119 DDAVAAVEVPAGADLVEAPLGGNVWKVLVEPGQAVEAGAVIAIIEAMKAECDVATPTAGV 1178
            D    A E   G+  + AP+ G V +VLVEPGQ VEAGA + ++EAMK E  +  P AG 
Sbjct: 582  DPTARAAEQEGGSGRLTAPMPGTVVRVLVEPGQTVEAGAPLMLLEAMKMEHTIKAPAAGT 641

Query: 1179 VSAVYAQPGQPIAAGAPVIAVTPVAE 1204
            VSAV    G  ++ G  ++ V  VAE
Sbjct: 642  VSAVNFAAGDQVSEGVDLL-VLDVAE 666