Pairwise Alignments

Query, 311 a.a., transposase from Caulobacter crescentus NA1000

Subject, 314 a.a., transposase IS116/IS110/IS902 family from Azospirillum brasilense Sp245

 Score =  126 bits (317), Expect = 6e-34
 Identities = 96/307 (31%), Positives = 140/307 (45%), Gaps = 28/307 (9%)

Query: 7   GVDVSLKTLDGWISGSGLELSVSRSPEGIAKLARFCAEHDVELVVMEATGGYEKLPFGLL 66
           G+D     LD  +        V+ + EG  +L  +  E  + +V +EA+GGYE+     L
Sbjct: 9   GIDCGKDFLDVAVFPGAGWHRVANTSEGHRELVAWITERAIGVVGLEASGGYERPVRNAL 68

Query: 67  WAAGVPCAIANARSVRRFAEAMGVLEKTDRIDARIIADYAATKGLTSQAPESQIQERLRA 126
            AAGV   + +   VR FA+A G   K DR+DA +IA++ AT+      P    +E L  
Sbjct: 69  RAAGVSVRVFDPARVRHFAKAKGRRAKNDRLDAAVIAEFTATQTAELLLPADPAREELAG 128

Query: 127 LVARLRQLTQLKV--------AQSNQRRLVDE-----PQVVASFDEMLALIARQSRALEI 173
           L+   R L   +         A +  R  +        Q +A+ D  +A  A+   +L  
Sbjct: 129 LIKARRLLVSKRADLGKGIPHAPAAAREALTNAVEHLAQEIATLDAAIAQTAKTLSSLSR 188

Query: 174 QIADLLGADPLWRALDAALREIKGVAGRTVARLMAEMPEIGTVSNKAVAKLAGLAPIARD 233
            + DL  A               G+   T   L   +PE+G +S   +A L G+AP  RD
Sbjct: 189 TVQDLQTA--------------PGIGPLTAVTLAVLLPELGRISGGKIAALVGVAPFDRD 234

Query: 234 SGLRKGKRPIRGGRANVRSILVVVASVVARHDPD-LAAFHQRLTQAGKPKMAVRVAVARK 292
           SG  +G+R I GGRA+VR  L +     A H    +A F++ L   GKP      A  RK
Sbjct: 235 SGTLRGQRHIAGGRADVRRALYLATLSAATHAKGVIADFYEGLIGRGKPPKVALAACMRK 294

Query: 293 LLVRLNA 299
           L+VRLNA
Sbjct: 295 LIVRLNA 301