Pairwise Alignments

Query, 311 a.a., transposase from Caulobacter crescentus NA1000

Subject, 337 a.a., transposase of insertion sequence ISRm19 protein from Sinorhizobium meliloti 1021

 Score =  105 bits (261), Expect = 2e-27
 Identities = 90/302 (29%), Positives = 137/302 (45%), Gaps = 20/302 (6%)

Query: 7   GVDVSLKTLDGWISGSGLELSVSRSPEGIAKLARFCAEHDVELVVMEATGGYEKLPFGLL 66
           G+D     LD        +  V  + +G   LA +     +  V +EA+GGYE+     L
Sbjct: 26  GIDTGKTWLDVATYPVSDKQKVPNNADGWQTLADWLERQGIGRVGIEASGGYERDVIAYL 85

Query: 67  WAAGVPCAIANARSVRRFAEAMGVLEKTDRIDARIIADYAATKGLTSQAPESQIQ----- 121
              G    +   R VR F        K D++DA +IA+ AA       AP+S++      
Sbjct: 86  HRRGFEVVLLQPRQVRAFGLYKLRRAKNDQLDAALIAECAARSDARCHAPDSRLIAFGEW 145

Query: 122 ----ERLRALVARLRQLTQLKVAQSNQRRLVDEPQVVASFDEMLALIARQSRALEIQIAD 177
               E++ A +A L+   +    +   RR+++E  +  S  E+ +    Q   L+  + +
Sbjct: 146 LLFIEQIEADIACLKTRRE----RFTDRRILEE--IDRSIGELKSRCKAQLALLQAAVRE 199

Query: 178 LLGADPLWRALDAALREIKGVAGRTVARLMAEMPEIGTVSNKAVAKLAGLAPIARDSGLR 237
               D L R LD  +  I G+  RT   L+  MPE+G V  + +A L G+AP    SG R
Sbjct: 200 ---HDDLARKLDL-IESIDGIGIRTALTLVILMPELGRVDREEIAALTGVAPYDDQSGKR 255

Query: 238 KGKRPIRGGRANVRSILVVVASVVA-RHDPDLAAFHQRLTQAGKPKMAVRVAVARKLLVR 296
           +G+R I GGRA VR  L   A   + R +  L   + RLT  GK   A  +A  RKL++ 
Sbjct: 256 EGERHIAGGRARVRRALFNAALPASQRWNETLVELYDRLTAKGKSHKAALIACVRKLIIF 315

Query: 297 LN 298
            N
Sbjct: 316 AN 317