Pairwise Alignments

Query, 425 a.a., tRNA/rRNA methyltransferase from Caulobacter crescentus NA1000

Subject, 428 a.a., sun protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  115 bits (289), Expect = 2e-30
 Identities = 89/326 (27%), Positives = 149/326 (45%), Gaps = 15/326 (4%)

Query: 99  GALTDVERERLAAPVPIEGAPAPVAGDYPDWLEPHLARALGADQAAEMRALSERAPVDLR 158
           G L +++R+      P+      ++ + P WL   L  A   +    ++   ER P+ LR
Sbjct: 117 GVLRNIQRQL----TPLSNESETLSYNTPGWLIKRLKTAYPGNWQEIIQQSHERPPMWLR 172

Query: 159 VNTLKTDVERCAKALALIDA-APAGVLATAFRIPAPAAADRTPSVEAVPAFSKGWFEVQD 217
            N L    +    AL  ++  A AG+   A  + AP        V  +P F +G   VQD
Sbjct: 173 NNRLSQSRDEYLAALDKLEIDASAGLSDDAILLAAPK------DVATLPLFLEGAASVQD 226

Query: 218 LGSQIAAAVAGDVKGKQVLDFCAGGGGKTLALAAAMGNSGQIFAHDSDARRLADTIRRGQ 277
             +Q AA +      + +LD CA  GGK+  L   +  S ++ A D DA+RL    +   
Sbjct: 227 GAAQWAATLLAPQANELILDACAAPGGKSCHLLE-LEPSIKLIAVDFDAKRLERVQQNLD 285

Query: 278 RAGVRNLQIRSPIEATPLKGLEGKIDVVFVDAPCTGAGTWRRHPDAKWRLSPDQLAKRQI 337
           R  ++   I              + D + +DAPC+  G  RRHPD KW      + +   
Sbjct: 286 RLSLKAEVIHGDAANIDSWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRKNHDIEELAE 345

Query: 338 EQDSVLEDAAAFVKAGGRMIYVTCSLLTEENEDRVAAFLERHPEFTVKPIALDGVTHVTP 397
            Q  +L+    ++K GG ++Y TCS+L +EN D+++AFL R  +  +  +     +    
Sbjct: 346 LQRQILDHCWKWLKPGGTLLYATCSILPQENRDQISAFLARTADAKLDTLVQQASSQ--- 402

Query: 398 EGYLRLTPHRAGTDGFFAAVLQRASY 423
           +   ++TP +   DGF+ A L +A++
Sbjct: 403 DIGWQITPGQHNMDGFYYARLLKATH 428