Pairwise Alignments

Query, 892 a.a., osmosensitive K+ channel histidine kinase kdpD from Caulobacter crescentus NA1000

Subject, 918 a.a., sensor protein KdpD from Herbaspirillum seropedicae SmR1

 Score =  517 bits (1331), Expect = e-150
 Identities = 331/919 (36%), Positives = 489/919 (53%), Gaps = 58/919 (6%)

Query: 8   RPDPEALLAAA----NKARRGRLKVFLGMAPGVGKTYEMLRAARRRKAEGADVLIGVVET 63
           RPDP+ LL        +  RGRLK+F G + GVGKT+ ML AA+   A+G DV+ GVVET
Sbjct: 4   RPDPDDLLERVMRDEERQARGRLKIFFGFSAGVGKTFAMLEAAQALAAQGGDVVAGVVET 63

Query: 64  HGRRETESLLRGMDVLPRRPIEHRGRVQMEFDIDAALERKPKILLVDEYAHSNAIGSRHP 123
           HGR ETE+ L G+  LP R + +R R   EFD+DAALERKP ++LVDE AHSN  GSRH 
Sbjct: 64  HGRAETEAQLAGLARLPMRMVAYRDRQLPEFDLDAALERKPGVILVDELAHSNVPGSRHA 123

Query: 124 KRWQDVEELLAAGIDVWTTLNVQHLESLVDVVQRITGVRQRETVPDSALSRADDIELVDI 183
           KRWQD++ELL AGIDV+TTLNVQH+ESL DVV +ITG+R  ETVPD     ADD+ LVDI
Sbjct: 124 KRWQDIDELLRAGIDVYTTLNVQHIESLNDVVGQITGIRVFETVPDHVFDEADDVMLVDI 183

Query: 184 TPDELRERMAAGKVYVPETARLAADNFFKVENLTALRELALRRAAQTVDDQLIATMREKG 243
            PDEL  R+  GKVY+P+ A  A  NFF+  NL ALRE+ALRR A  VD  +     ++ 
Sbjct: 184 PPDELLARLQQGKVYLPQQAEKAGRNFFRKGNLIALREIALRRTADRVDADMRQYRADRS 243

Query: 244 VEGPWAAGERILVLVSGDAMAATLVRAGRRLSDMMMDAPWIVTHVERTDRPLARDGDAAR 303
           +   W A E I+V +   +    L+R   RL+   + A W+  HV   D P  R    AR
Sbjct: 244 IAQLWQARECIVVAIGSGSGEERLIREAARLA-AKLQAQWLAVHV---DLPGQRQAMEAR 299

Query: 304 LR--EAYRLAEQLGGATVALSGGDIVDTVMAYARRHNVTQIVIGKSVESRWRELL---ER 358
            R     +LA  LG  T ++SG ++   ++ +AR  N  ++VIG+  E   R LL     
Sbjct: 300 ERVVSYLKLAHSLGAETASISGEELAAALLQFARSRNAGKLVIGQE-EGGLRRLLRWPRG 358

Query: 359 SLAGALLREARGVAVHVVTEAAPEREPRPPAP-----------LRPDRWRGYAVGALFIA 407
           +LA  + R    + ++ +  +    +  P +P            R  R RG        A
Sbjct: 359 TLAQRIARSGGEIDLYTIARSRTRHQHEPASPDSAASAAEALLTRRRRTRGTLWAVASCA 418

Query: 408 AATLAAWGLDVAFNRVDLGMIFLTAVLAAGVLHGLRPALAAATVAFLVYNCLFLEPRYSF 467
             T  A+ LD   +  ++ M++L  V+   + +G   +   + ++ L ++  F++PR+S 
Sbjct: 419 ITTTLAFLLDGKLHPANVIMLYLVGVMLVAMRYGRAASALVSVLSVLSFDFFFVDPRFSI 478

Query: 468 VVGSPTDFITLVVFWAVALASGGLAGRVREQALGSQRRAAAVTTLLAASRTFSAASGRDA 527
            V      +TL V  AV+L    LA R+R QA  + +R A    L    +  SA    D 
Sbjct: 479 TVSDAQYLLTLAVMLAVSLFISSLAARLRRQASVAMQREARAANLYMLGKELSALLTLDQ 538

Query: 528 VAKALAEQVSAAAGGLAVVLLP-QGDEIALAHGSPELAPLDA---AQMAAARWAWDKGEV 583
           + +     ++A  G      LP   D++ LA    +              A+W +D G+ 
Sbjct: 539 ILEIGRRHLAAVFGARIAFFLPDSADQLRLAEPEQDSGAAHVFRNVDAGVAQWVYDNGQA 598

Query: 584 AGFGTGTLPQSRWTFWPLDGVRARTGVAGLA----------AGAAPLGADQERLVLALL- 632
           AG GT TLP +   + PL       GV   A            AA L   + R +L +  
Sbjct: 599 AGKGTATLPSAAALYLPLTATMRTRGVLAFAIEAPSEEERQLAAAQLALPENRQMLEIFC 658

Query: 633 EQGAVALERSQLAAEAVETETLRRADRFRSALMNSVSHDLRTPLSTVLGASTTLIDYGDK 692
            Q A+A+ER   A  A +      ++R R++L++++SHDLRTPL++++G++       D 
Sbjct: 659 SQIAMAIERLHYAEVAQDALVTMESERLRNSLLSAISHDLRTPLTSLVGSA-------DV 711

Query: 693 LAKPVRED-----LVVSIREEAERLNRYVANLLDMTRIEGGALRLRTDWIDVRDVLNAAA 747
           LA   R D     +  +I E+++++   + NLLDM R++ G + L   W  + ++  +A 
Sbjct: 712 LAANARLDDDARAMARTISEQSQKMVGLMNNLLDMARLQAGVVTLNRQWNALEELAGSAL 771

Query: 748 DRVSRRLGGRELARDFPRELSLIQADASLLEQVVVNVLENAIAYSPPEARIEMAAYEDRA 807
             +++ L GR++      EL L++ DA LLE+V+ N++ENAI YSPP   I ++A+ +  
Sbjct: 772 RLLAKALEGRQVDTRIAPELPLLRVDAVLLERVLANLVENAIKYSPPGTPIGISAHVEHG 831

Query: 808 N----VVISIEDEGRGIPTSELERVFDKFRRMEEPSDRTQGAGLGLSIAKGFIDALGGRI 863
           +    V + + D+GRG P +  +  F+KF R +  S  T G GLGL+I +  I+A  GRI
Sbjct: 832 DGAPQVKVCVMDQGRGFPPTMTQHAFEKFTRGDNES-ATPGVGLGLAICRAIIEAHQGRI 890

Query: 864 AAASPIHDGRGTRILISLP 882
             A P   G+G  +  +LP
Sbjct: 891 WIA-PQEAGQGATVCFTLP 908