Pairwise Alignments

Query, 759 a.a., topoisomerase IV subunit A from Caulobacter crescentus NA1000

Subject, 761 a.a., DNA topoisomerase IV subunit A from Vibrio cholerae E7946 ATCC 55056

 Score =  501 bits (1291), Expect = e-146
 Identities = 299/749 (39%), Positives = 441/749 (58%), Gaps = 34/749 (4%)

Query: 16  DRILDEPLTEALSRRYLAYALSTIGSRALPDVRDGLKPVHRRVLYAMSNMRLNPDAAARK 75
           D +   PL +     YL Y++  I  RALP + DGLKPV RR++YAMS + L+  A  +K
Sbjct: 8   DGVEQLPLRKFTEDAYLNYSMYVIMDRALPYIGDGLKPVQRRIIYAMSELGLSASAKYKK 67

Query: 76  CAKVVGEVMGNFHPHGDASIYDALVRLAQEFSQRIPLVEGQGNFGNIDGD-SAAAMRYTE 134
            A+ VG+V+G +HPHGD++ Y+A+V +AQ FS R PLV+GQGN+G  D   S AAMRYTE
Sbjct: 68  SARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTE 127

Query: 135 CKMTEAAMLLLDGIDEDAVDFRPTYDGQDEEPVVLPSGFPNLLANGSSGIAVGMATSIPP 194
            K+++ A +LL  + +  VD++P +DG  +EP +LP+  P++L NG +GIAVGMAT IPP
Sbjct: 128 AKLSKFAEILLSELGQGTVDWQPNFDGTMQEPKMLPARLPHILLNGVTGIAVGMATDIPP 187

Query: 195 HNAAELIDACQLLLANPDATTADLLEKVPGPDFPTGGVIVESRASLLETYETGRGGVRMR 254
           HN  E+ DA   L+ NP+A   DL++ V GPDFPT   I+     L + Y +GRG ++MR
Sbjct: 188 HNVREVADATIHLIDNPNAPLTDLMQYVKGPDFPTEAEIITPTVELEKIYRSGRGSIKMR 247

Query: 255 AKWEKEDTGRGTYQIVVTEIPYQVKKSDLVEQLADLIDSKKAALLGDVRDESAED--IRL 312
           A W KE +      IV+T +P+QV  + L+EQ+A  + +KK  ++ D+RDES  +   R+
Sbjct: 248 AVWCKEGS-----DIVITALPHQVSGAKLLEQIAAQMRAKKLPMVEDLRDESDHENPTRI 302

Query: 313 VLEPKSKNVEPEVLMESLFKLSALESRFPVNINVLDARGTPGVMGIKQALMAFLAHRREV 372
           V+ P+S  V+ ++LM  LF  + LE  F VN+N++     P V G+ Q L  +++ RRE 
Sbjct: 303 VIVPRSNRVDCDLLMNHLFASTDLEKSFRVNLNMIGLDNRPQVKGLVQILSEWISFRRET 362

Query: 373 LTRRARHRLAKIEARLHILDGLLIAYLNLDEVIRIVRYEDKPKEKLIETFGLTDIQADAI 432
           +  R ++RL K+ ARLHIL GLLIAYLNLDEVI I+R ED PK  L+  F LTDIQADAI
Sbjct: 363 VRSRLQYRLDKVLARLHILQGLLIAYLNLDEVIEIIRNEDDPKAVLMARFDLTDIQADAI 422

Query: 433 LNTRLRQLAKLEEMEIRREHAELVEERDGILAMLASEAKQWKLVGVGLSEVRAALLKIKH 492
           L+T+LR LAKLEEM+IR E  EL +ER  +  +L SE +   L+            +IK 
Sbjct: 423 LDTKLRHLAKLEEMKIRGEQDELEKERKKLEELLGSERRLNNLL----------KKEIKA 472

Query: 493 PLDKPRPTGVTGRSVFGEAPQVDADAAIEAMIVREPITIILSERGWIRAAKGKIDDPSEL 552
             DK    G   RS   E  +  A    + M   E IT++LSE+GWIR AKG   D   L
Sbjct: 473 DADK---FGDDRRSPLVEREEAKALTERDLM-PSEAITVVLSEKGWIRHAKGHDVDCQSL 528

Query: 553 KFKEGDKLGFLVPAETTDKLLIFSSDGRFFTLGCDKLPSARGHGEPVRMMIELDDKVKII 612
            +K GD        ++  + +   SDGR ++L    LPSARG GEP+   + + +   I 
Sbjct: 529 NYKAGDNYLTHACGKSNQQAVFLGSDGRSYSLESHTLPSARGQGEPITGRLNVAEGTTIR 588

Query: 613 DVFPFKAGRKRILASKGGYGFLMPEEEALANRKAGKQVLNVGNEGAAFCLEAV----GDQ 668
            V   +  +  ++ S  GYGF+   ++ L+  ++GK ++N+         + +     D+
Sbjct: 589 QVVMGEEDQLWLVGSDAGYGFVCKGDDLLSKNRSGKALINLPENSEVMTPQVIADLDNDE 648

Query: 669 LAVIGDNGKILIFPLEELPEMPRGKG---VKLQAYREGGLRDGLS--FNAETGAYWIDTA 723
           +  I + G++L+FP+++LP++ +GKG   + + A +     + LS       GA     A
Sbjct: 649 ILAITNQGRMLLFPIKDLPQLSKGKGNKIINIPAAKAKTREEVLSNLMVLPQGASITLYA 708

Query: 724 GRRR---DWAEWKEWVGRRAGAGKLVPKG 749
           G+R+     ++   + G R   G L+P+G
Sbjct: 709 GKRKLGLKVSDLDNFRGERGRRGALLPRG 737