Pairwise Alignments

Query, 759 a.a., topoisomerase IV subunit A from Caulobacter crescentus NA1000

Subject, 758 a.a., DNA topoisomerase IV subunit A from Sinorhizobium meliloti 1021

 Score =  851 bits (2198), Expect = 0.0
 Identities = 443/767 (57%), Positives = 563/767 (73%), Gaps = 22/767 (2%)

Query: 1   MNKPVLPPPGGPDDGDRILDEPLTEALSRRYLAYALSTIGSRALPDVRDGLKPVHRRVLY 60
           M + +LPP GG D+   I    L  AL  RYLAYALSTI  RALPDVRDGLKPVHRR+++
Sbjct: 1   MGQSLLPPSGGDDN---IQPVDLKAALEERYLAYALSTIMHRALPDVRDGLKPVHRRIIH 57

Query: 61  AMSNMRLNPDAAARKCAKVVGEVMGNFHPHGDASIYDALVRLAQEFSQRIPLVEGQGNFG 120
           AMS M L P+++ +KCA++VG+V+G FHPHGD S+YDALVRLAQ+FSQR P+V+GQGNFG
Sbjct: 58  AMSEMGLRPNSSFKKCARIVGDVIGKFHPHGDQSVYDALVRLAQDFSQRYPVVDGQGNFG 117

Query: 121 NIDGDSAAAMRYTECKMTEAAMLLLDGIDEDAVDFRPTYDGQDEEPVVLPSGFPNLLANG 180
           NIDGD+AAA RYTE KMTE A LLL+GID+DAVDFRPTY+ +D+EP VLP  FPNLLANG
Sbjct: 118 NIDGDNAAAYRYTEAKMTEVAALLLEGIDQDAVDFRPTYNEEDQEPTVLPGAFPNLLANG 177

Query: 181 SSGIAVGMATSIPPHNAAELIDACQLLLANPDATTADLLEK--------VPGPDFPTGGV 232
           +SGIAVGMATSIPPHNA EL DA   L+ +PDAT  DLL          + GPDFPTGGV
Sbjct: 178 ASGIAVGMATSIPPHNAHELCDAALHLIKHPDATVEDLLFDPANPQRGGIEGPDFPTGGV 237

Query: 233 IVESRASLLETYETGRGGVRMRAKWEKEDTGRGTYQIVVTEIPYQVKKSDLVEQLADLID 292
           IVESRAS+ E+Y TGRGG R+RA+W  ED GRG +QIVVTEIPYQV+KS L+E++A+L+ 
Sbjct: 238 IVESRASMAESYRTGRGGFRVRARWAVEDLGRGGFQIVVTEIPYQVQKSRLIEKIAELLI 297

Query: 293 SKKAALLGDVRDESAEDIRLVLEPKSKNVEPEVLMESLFKLSALESRFPVNINVLDARGT 352
           ++K  LL D+RDESAED+R+VL PKS++V+  +LMESLFKL+ LESR P+N+NVL     
Sbjct: 298 ARKLPLLEDIRDESAEDVRVVLVPKSRSVDANILMESLFKLTELESRIPLNMNVLSMGRV 357

Query: 353 PGVMGIKQALMAFLAHRREVLTRRARHRLAKIEARLHILDGLLIAYLNLDEVIRIVRYED 412
           P VM + + L  +LAHRREVL RR+RHRLA I+ RL IL G LIAYLN+DEVIRI+R ED
Sbjct: 358 PRVMALNEVLSEWLAHRREVLQRRSRHRLAAIDRRLEILGGYLIAYLNIDEVIRIIREED 417

Query: 413 KPKEKLIETFGLTDIQADAILNTRLRQLAKLEEMEIRREHAELVEERDGILAMLASEAKQ 472
           +PK  +IE FGLTD+QA+AILN RLR L KLEE EIR E   L +E+  I A+LAS  KQ
Sbjct: 418 EPKAVMIERFGLTDVQAEAILNMRLRSLRKLEEFEIRTEFDSLSKEKAEIEALLASGDKQ 477

Query: 473 WKLVGVGLSEVRAALLKIKHPLDKPRPTGVTGRSVFGEAPQVDADAAIEAMIVREPITII 532
           W+ V   + EV+    K    L K        RS F +AP  D +A  +AMI +EPIT++
Sbjct: 478 WQAVAWEIGEVKKKFAKATE-LGK-------RRSTFSDAPDADVEAIQQAMIEKEPITVV 529

Query: 533 LSERGWIRAAKGKIDDPSELKFKEGDKLGFLVPAETTDKLLIFSSDGRFFTLGCDKLPSA 592
           +SE+GWIRA KG I D S L+FK+GD L    PA+TTDK+LIF++ G+ +TLG DKLP  
Sbjct: 530 ISEKGWIRALKGHIADTSSLQFKDGDGLKVSFPAQTTDKILIFTTGGKAYTLGGDKLPGG 589

Query: 593 RGHGEPVRMMIELDDKVKIIDVFPFKAGRKRILASKGGYGFLMPEEEALANRKAGKQVLN 652
           RGHGEP+R+M+++++   ++  F     RK I++S  G GF++ E + +AN + GKQV+N
Sbjct: 590 RGHGEPLRIMVDMENDQDVLTAFVHDPARKLIVSSTAGNGFVVTESDIVANTRKGKQVMN 649

Query: 653 VG-NEGAAFCLEAVGDQLAVIGDNGKILIFPLEELPEMPRGKGVKLQAYREGGLRDGLSF 711
           V   + A   +   GD LAV+G+N K+L+FPL ++PEM RGKGV+LQ Y++GG+ D  SF
Sbjct: 650 VTMPDEAKLVVPVKGDHLAVVGENRKMLVFPLVQVPEMARGKGVRLQRYKDGGVSDIRSF 709

Query: 712 NAETGAYWIDTAGR--RRDWAEWKEWVGRRAGAGKLVPKGFATNKRF 756
               G  W D+AGR   +   E  EW+G RAGAG++VPKGF  + +F
Sbjct: 710 AIAEGLTWEDSAGRVFTKTRDELIEWMGDRAGAGRVVPKGFPRSGKF 756