Pairwise Alignments

Query, 759 a.a., topoisomerase IV subunit A from Caulobacter crescentus NA1000

Subject, 943 a.a., DNA gyrase, subunit A (NCBI) from Rhodospirillum rubrum S1H

 Score =  428 bits (1101), Expect = e-124
 Identities = 254/633 (40%), Positives = 374/633 (59%), Gaps = 58/633 (9%)

Query: 23  LTEALSRRYLAYALSTIGSRALPDVRDGLKPVHRRVLYAMSNMRLNPDAAARKCAKVVGE 82
           + + + R YL YA+S I SRALPDVRDGLKPVHRR+LY+M       +   RK A++VG+
Sbjct: 18  IEDEMKRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYSMKESGYEFNKPYRKSARIVGD 77

Query: 83  VMGNFHPHGDASIYDALVRLAQEFSQRIPLVEGQGNFGNIDGDSAAAMRYTECKMTEAAM 142
           VMG +HPHGD SIYDA+VR+ Q F+ R+PL++GQGNFG++DGD AAAMRYTE +M +AA 
Sbjct: 78  VMGKYHPHGDQSIYDAMVRMVQNFAMRLPLIDGQGNFGSMDGDRAAAMRYTEARMAKAAH 137

Query: 143 LLLDGIDEDAVDFRPTYDGQDEEPVVLPSGFPNLLANGSSGIAVGMATSIPPHNAAELID 202
            LLD ID++ VDF+P YD    EP+VLP+ FPNLL NG+ GIAVGMAT+IPPHN  E+ID
Sbjct: 138 SLLDDIDKETVDFQPNYDETTREPIVLPARFPNLLVNGAGGIAVGMATNIPPHNLGEVID 197

Query: 203 ACQLLLANPDATTADLLEKVPGPDFPTGGVIVESRASLLETYETGRGGVRMRAKWEKEDT 262
           AC  ++ NP  T  +LLE VPGPDFPTGG I+  R+ +   + TGRG V MR +   ED 
Sbjct: 198 ACCAMIDNPAVTAEELLELVPGPDFPTGGTIL-GRSGVRAAHLTGRGSVIMRGRTHFEDI 256

Query: 263 GRGTYQIVVTEIPYQVKKSDLVEQLADLIDSKKAALLGDVRDES-AEDIRLVLEPKSKNV 321
             G   I+VTE+PYQV K+ +VE++A+L+  KK   + D+RDES    +R+V+E K ++ 
Sbjct: 257 SGGRQAIIVTEVPYQVNKASMVEKIAELVREKKLEGISDIRDESDRRGVRVVIEVK-RDA 315

Query: 322 EPEVLMESLFKLSALESRFPVNINVLDARGTPGVMGIKQALMAFLAHRREVLTRRARHRL 381
             EV++  LF+ + L++ F VN+  L+  G P ++ ++  + AF+  R EV+ RR    L
Sbjct: 316 MAEVVLNQLFRYTPLQTSFGVNMLALNG-GKPELLALRPIIEAFITFREEVIRRRTIFEL 374

Query: 382 AKIEARLHILDGLLIAYLNLDEVIRIVRYEDKPKE-------------------KLIE-- 420
            K   R H L GL IA  NLD VI+++R    P+                    KLI+  
Sbjct: 375 GKARERAHTLVGLAIAVANLDPVIKLIREAPDPQAAREGLMARDWPAMDVEPLIKLIDEP 434

Query: 421 -------TFGLTDIQADAILNTRLRQLAKLEEMEIRREHAELVEERDGILAMLASEAKQW 473
                   + L++IQA AIL+ RL +L  LE  ++  E  E+ ++ +  L +L S A+ +
Sbjct: 435 GRMVIDGVYRLSEIQARAILDLRLHRLTGLERDKLHGELIEIGQQIEEYLHILRSRARLF 494

Query: 474 KLVGVGLSEVRAALLKIKHPLDKPRPTGVTGRSVFGEAPQVDADAAIEAMIVREPITIIL 533
           ++       +RA L+++K     PR T +       E  + + D  IE +I RE + + +
Sbjct: 495 EI-------MRAELVEMKEAYATPRRTTL-------EENEFEHD--IEDLIQREEMVVTV 538

Query: 534 SERGWI--------RAAKGKIDDPSELKFKEGDKLGFLVPAETTDKLLIFSSDGRFFTLG 585
           +  G+I        RA +      + +  ++ D +  +    T   LL FSSDG  + + 
Sbjct: 539 TNTGYIKRVPLTTYRAQRRGGRGRAGMSMRDEDFVTTIFVVNTHAPLLFFSSDGMVYKMK 598

Query: 586 CDKLP--SARGHGEPVRMMIELDDKVKIIDVFP 616
             +LP  + +  G+ +  ++ L++  +I  V P
Sbjct: 599 VYRLPLGTPQARGKAMVNIMPLNEGERITTVMP 631