Pairwise Alignments

Query, 672 a.a., cell elongation specific D,D-transpeptidase from Caulobacter crescentus NA1000

Subject, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

 Score =  319 bits (817), Expect = 3e-91
 Identities = 214/636 (33%), Positives = 329/636 (51%), Gaps = 43/636 (6%)

Query: 17  VFHRRAFL--LGGLTGLGLLTLGGRLAQLQLVEAQRYQKLSAGNQFNYRLVPPPRGLIMD 74
           +F  RA +  +G L  +GLL     L  +Q+ + Q Y+  S  N+     + P RGLI D
Sbjct: 17  LFRNRAIVSFVGILICMGLLVTN--LYNIQINQYQDYKTRSNDNRIKVVPIAPNRGLIFD 74

Query: 75  RNGVSLASNRPNFRLMINKEKGLEAEAVLDDLSKLVPIDGTRRARILKELDRAPRKAPVV 134
           RNGV LA NRP F L +  EK    E  +  L +L+ I   + A   KE  +  R   V 
Sbjct: 75  RNGVLLAENRPVFNLEVIPEKVPNMEETIARLQQLIEISPEKLAAFEKERKQTRRFNSVP 134

Query: 135 VMEDLSWEEFSRVNIRAPELPNVTADMGEVRVYPFGGAFAHVIGYVAKVSDRDL------ 188
           ++  L+ +E ++ ++   + P V+      R YP+G    HVIGYV++++D+DL      
Sbjct: 135 LLTQLTDDEVAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVSRINDKDLERLDKE 194

Query: 189 -KAAEGDATQDQELLHHPGFRIGKQGVEKAFDKDLRGRAGATKTEVDSVGRVVRLDPAGD 247
            K A   AT+D          IGK G+E+ ++  L G AG  + EV+S GRV+R      
Sbjct: 195 GKKANYQATRD----------IGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRT--LKY 242

Query: 248 IPPVAGKAIHLTLDADIQNRALEVMGEESGAIVVMDCRNGDLLCMASAPSFDANRFVRGL 307
           +PP+ GK I L LD ++Q  A +++    G+IV +D ++  +L MAS+PS+D N FV G+
Sbjct: 243 VPPIPGKDIVLNLDIELQLYAYKLLEGRRGSIVALDPKDNGVLAMASSPSYDPNAFVHGI 302

Query: 308 SGPEYKALAEYERKPLLDKSMTGLFPPGSTFKPTVGLAALAAG-IDPEVRVNCPGSWYYG 366
           SG  Y  L   +R+PL++++  G++PPGST KP + ++AL  G I P    N PG W   
Sbjct: 303 SGKAYSDLLNDKRRPLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNTTRNDPGYWRIP 362

Query: 367 G---RVWRCWEKGGHGPQNMHDAIKNSCDVYFYQISLKIGPDAIARAARAVGFGQTFDIG 423
               R +R W + GHG  ++  +++ S D +FYQI+  +G D ++      GFG    I 
Sbjct: 363 NTDTRPFRDWLRWGHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTGID 422

Query: 424 IPGQKKGIVPDREWKKRAFKRNPANQIWFPGETPSYAIGQGALTVNALQLAVMTARLANA 483
           I  + K  +P REWK    K       W+ G+T    IGQG  T   +Q+A  T+ L N 
Sbjct: 423 IYEESKANMPTREWKMARHK-----VPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNH 477

Query: 484 KKALVPRLIKSIGD-------MERPAGSDVPDLPFSP-EHLAYVRNGMAAVANDVRGTAY 535
            K + P L+++  D        +    +  P +   P ++     +GM  V +  +GTA 
Sbjct: 478 GKVIAPHLLRATIDNGEQFSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTAR 537

Query: 536 RNSQLGLGDVQMAGKTGTAQVRSYDKGVSRDSKDVRWRLKDHNLFVAFAPYDDPRYAVSV 595
           R  Q      + AGK+GTAQV    +G   ++ ++   L DH LF  FAP  DP+  V+ 
Sbjct: 538 RAFQ--NMPYESAGKSGTAQVFGLAEGQKYNASELAEHLHDHALFTGFAPVKDPKVIVTF 595

Query: 596 IIEHGGLGGATAGAPRAREVMRVALLKDPEIRARIE 631
           ++E+GG GG++ GAP  R++    +L   E   + E
Sbjct: 596 VLENGG-GGSSNGAPVVRQIFDHVILGKKEEEPKAE 630