Pairwise Alignments

Query, 672 a.a., cell elongation specific D,D-transpeptidase from Caulobacter crescentus NA1000

Subject, 755 a.a., penicillin-binding protein 2 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  308 bits (789), Expect = 6e-88
 Identities = 204/634 (32%), Positives = 321/634 (50%), Gaps = 37/634 (5%)

Query: 39  RLAQLQLVEAQRYQKLSAGNQFNYRLVPPPRGLIMDRNGVSLASNRPNFRLMINKEKGLE 98
           R   LQ+   + + +L+  ++     +   RGL+ DR G  LA NRP F L + +E   +
Sbjct: 34  RFWYLQIHRGEDFARLARESRLRQERIYASRGLLRDREGRLLAENRPAFGLALVREDCRD 93

Query: 99  AEAVLDDLSKL--VPIDGTRRARILKELDRAPRKAPVVVMEDLSWEEFSRVNIRAPELPN 156
             + L  +S+   +P+D    A+  ++  R      ++++ D+ ++  +R+  R  + P 
Sbjct: 94  IPSTLAQVSEWTGIPLDQLT-AKFNQDRQRVKPFEHLLLISDMPFDLLARIENRVLQWPG 152

Query: 157 VTADMGEVRVYPFGGAFAHVIGYVAKVSDRDLKAAEGDATQDQELLHHPGFRIGKQGVEK 216
           +       R YP G   AH++GYVA+ ++++L        +D + L+   F +GKQG+E 
Sbjct: 153 LEIVTRSKRNYPQGELMAHILGYVAEANEKEL--------EDDKNLNLGDF-VGKQGLEL 203

Query: 217 AFDKDLRGRAGATKTEVDSVGRVVRLDPAGDIPPVAGKAIHLTLDADIQNRALEVMGEES 276
             ++ LRG+ G  + EVD +GR +      +  P +G+ I L +D  +Q  A + + +++
Sbjct: 204 VLERRLRGQKGLHQLEVDVLGRQLNKKLVQE--PQSGENIDLAIDLGLQQVAWDALEDQT 261

Query: 277 GAIVVMDCRNGDLLCMASAPSFDANRFVRGLSGPEYKALAEYERKPLLDKSMTGLFPPGS 336
           G +V MD   G LL + + PSFD N F  GLS  E+ AL +  R PL ++ +  ++PPGS
Sbjct: 262 GCVVAMDPDTGKLLALVTKPSFDNNAFAAGLSLKEWTALRDNPRHPLQNRVIQSVYPPGS 321

Query: 337 TFKPTVGLAALAAGIDPEVRVNCPGSWYYGGRVWRCWEKGGHGPQNMHDAIKNSCDVYFY 396
            +K  +    L  G++P   V C G    G +V+RCW+KGGHG  +M  ++  SCDVY+Y
Sbjct: 322 VWKLMMAGMLLNEGVNPADSVWCTGEVALGKQVFRCWKKGGHGRVDMMRSLIESCDVYYY 381

Query: 397 QISLKIGPDAIARAARAVGFGQTFDIGIPGQKKGIVPDREWKKRAFKRNPANQIWFPGET 456
           Q+S + G D I   A+A GFG    I +P +K G+VP + WK+R F      + W  GET
Sbjct: 382 QMSDRFGIDKIEAFAKACGFGAATGIDLPHEKSGLVPSKTWKRRRF-----GEPWHRGET 436

Query: 457 PSYAIGQGALTVNALQLAVMTARLANAKKALVPRLIKSIGDMERPAGSDVPDLPFSPEHL 516
            + +IGQG   V  +Q+A   + L N  K L P L+     + R +      LPF+    
Sbjct: 437 LNISIGQGFTLVTPVQVAAFVSALMNGGKLLKPSLLADEEQVVRAS------LPFTAAGR 490

Query: 517 AYVRNGMAAVANDVRGTAYRNSQLGLGDVQMAGKTGTAQVRSYDKGVSRD---SKDVRWR 573
             + +GM    ND RGTA     L   D  M GKTGTAQV    K V  +   ++++ + 
Sbjct: 491 KMILDGMRLTVNDDRGTA---KVLRRSDAVMGGKTGTAQVTKL-KMVGEERVRTENLAYE 546

Query: 574 LKDHNLFVAFAPYDDPRYAVSVIIEHGGLGGATAGAPRAREVMRVALLKDPEIRARIERP 633
            +DH     +      R  V V++EHGG GG+ AG P AR V        P         
Sbjct: 547 HRDHAWIATWGEKAGKRLVVVVMVEHGGHGGSDAG-PVARRVFDKFFGAPPGTAT----A 601

Query: 634 APLPEAVPEADIEGAAPEDPVEAPPPAPEAPTTP 667
           AP  +  P + +   AP  P ++ P  P +P TP
Sbjct: 602 APAGQVEPASPVSPTAPAQPSQSAPAMPVSPVTP 635