Pairwise Alignments

Query, 783 a.a., NAD-dependent DNA ligase from Caulobacter crescentus NA1000

Subject, 813 a.a., NAD-dependent DNA ligase LigA from Ralstonia sp. UNC404CL21Col

 Score =  518 bits (1334), Expect = e-151
 Identities = 341/795 (42%), Positives = 441/795 (55%), Gaps = 65/795 (8%)

Query: 32  YHQEDNPTVSDAEYDALKRRNLDIETRFPHLVRDNSPSMRVGATRAEQFAPVEHGVPMLS 91
           Y+  D P+V DAEYD L R    +E+  P L   +SP++RVG     +FA V H +PMLS
Sbjct: 31  YYVLDRPSVPDAEYDRLYRELEALESEHPELKTPDSPTLRVGGAVLPEFAAVRHVIPMLS 90

Query: 92  L--DNAFSNDEAIEFDARVRRFLRISPSET-VAYTAEPKIDGLSASLRYEKGVLVQGATR 148
           +  +   + + A  FDA VRR L +  ++  V Y AE K DGL+ SLRYE+G LVQ ATR
Sbjct: 91  IRTETDTTANGARAFDASVRRELGLDDTDPPVEYAAELKFDGLAISLRYERGYLVQAATR 150

Query: 149 GDGRVGEDVTANLRTIADIPHRLK--GSGWPDVIEVRGEVYVELAAFAAFNKAAEEAGQR 206
           GDG  GEDVT N+RTI  IP  L       PDV+EVRGEVY+    F   N    E G +
Sbjct: 151 GDGTTGEDVTQNIRTIRQIPLGLSPVDGHVPDVLEVRGEVYMRRDDFEKLNARQRERGDK 210

Query: 207 TYANPRNFAAGSLRQIDPKISAQRPLRFFGYAWGLVS--EGFADSQWGALERLAEWGFVT 264
           T+ NPRN AAG++RQ+DPK++A+RPL FF Y  G V   +G  ++  G L+ L  +GF  
Sbjct: 211 TFVNPRNTAAGAVRQLDPKMAAERPLSFFAYGLGEVVGWKGMPETHSGMLDALQAFGFPV 270

Query: 265 TAPPAQRVLNAQGLLDIYAQFEVLRPTLGFDIDGVVYKVDDLELQRRLGFVSRSPRWAIA 324
           +A  A  V    GL++ +      R +L FDIDGVVYKV+ L LQR LGF +R PRWA+A
Sbjct: 271 SAERAA-VKGGDGLVEFHDAIGTKRDSLPFDIDGVVYKVNSLALQRELGFRTREPRWAVA 329

Query: 325 RKFPAQRARTVLEAIDLQVGRTGAITPVARLKPVTVGGVSVTNATLHNGDEIARLDVRVG 384
            K+PAQ A T +E+I +QVGRTGAITPVARL PV VGGV+VTNATLHN DE+ R DVRVG
Sbjct: 330 HKYPAQEALTTVESIGVQVGRTGAITPVARLVPVFVGGVTVTNATLHNEDEVRRKDVRVG 389

Query: 385 DTVVIQRAGDVIPQIVEVALDARP--------------DPAPPPYEFPHVCPCPLQTPLA 430
           DTV+++RAGDVIP++V V LD RP               P  PP+E P  CP    + + 
Sbjct: 390 DTVIVRRAGDVIPEVVSVVLDRRPMDDVPGSDLFSPQQQPKYPPFELPKTCPV-CGSHVV 448

Query: 431 REVTASGQESVVRRCTGEFACPFQRVEHLRHFVSRRAFDIEGLGEKQLQAFFEEGWITEP 490
           RE     +   V RC+G   C  QR E +RHF  RR  DIEGLGE+ +    E  ++   
Sbjct: 449 RE-----EGEAVARCSGGLFCSAQRKEAIRHFAGRRMMDIEGLGERYIDNLVELDYVHGI 503

Query: 491 ADIFKLARD--AEKLAVLREREGYGETSVA----------NLVKGIEARRTIGMDRMIYG 538
           AD++KL  +   E      ER+G    +V+          NL++GI+A +T  + R ++ 
Sbjct: 504 ADLYKLKLEDFLEMKRRADERDGVTPETVSAGKIATKWAENLLEGIQASKTPPLARFLFA 563

Query: 539 LGARDIGETTSTVLARNFDRFEDLQAAAEAAARALP--GETYLELSTAPGVGPK---ALD 593
           LG R +GE+T+  LA        ++ A      ALP  G T  E        PK   ALD
Sbjct: 564 LGIRHVGESTAKTLADWLGSLAIIRRAPAPLLLALPDVGATVAEAIADFFAEPKNQQALD 623

Query: 594 MLVEA-----GKGGVVADPWPQTDDLELKIGHAVPKLTKPARAALAQRYGTWDAFADGLV 648
            L+EA     G+    A    + +  EL     VPKLT      LA    T    A    
Sbjct: 624 ALLEAGVAPQGEHAPNAKLREKLEPAELYATLGVPKLTATRAKQLAVAAPTLAHLASVEP 683

Query: 649 AAASGAPGDDYLHLAAIDGVGPVAAQSLARFFAEDHNRQ--KVANLVAELDIQPVAKPKT 706
              +G P D             VAA  L    + DH  Q  K+  L  EL     A+   
Sbjct: 684 EQLAGLPAD-------------VAASLLEWLASHDHRAQLTKLDALRGELLATMPAEAAE 730

Query: 707 DTAVAGKTIVFTGSLEKMTRDEAKAQAEGLGAKVASSVSKKTDLVVAGPGAGSKLKTATD 766
           +  +AGKT+V TG+L  +TRDEAKA  E  GAKV+ SVSKKTD VVAG  AGSKL  A +
Sbjct: 731 EGVLAGKTVVLTGTLPNLTRDEAKAMLEAAGAKVSGSVSKKTDFVVAGEDAGSKLAKAEE 790

Query: 767 LGIQVMTEDEWLELV 781
           L ++V+ E   L L+
Sbjct: 791 LNVKVLDEAGMLALL 805