Pairwise Alignments

Query, 783 a.a., NAD-dependent DNA ligase from Caulobacter crescentus NA1000

Subject, 688 a.a., DNA ligase from Burkholderia phytofirmans PsJN

 Score =  431 bits (1108), Expect = e-125
 Identities = 253/544 (46%), Positives = 327/544 (60%), Gaps = 19/544 (3%)

Query: 31  AYHQEDNPTVSDAEYDALKRRNLDIETRFPHLVRDNSPSMRVGATRAEQFAPVEHGVPML 90
           AY+  D P + DAEYD L +    IET  P L+  +SP+ RVG   A  F PV H  PML
Sbjct: 31  AYYVLDQPDLPDAEYDKLFKELESIETEHPDLIVPDSPTQRVGGEAASGFEPVVHDQPML 90

Query: 91  SLDNAFSNDEAIEFDARVRRFLRISPSET---VAYTAEPKIDGLSASLRYEKGVLVQGAT 147
           SL+N F++++ + FD RV   L  + SE    V Y AE K DGL+ SLRY  G  VQ +T
Sbjct: 91  SLNNGFADEDIVAFDKRVGDALGKNASEPPVPVDYAAELKFDGLAISLRYVDGAFVQAST 150

Query: 148 RGDGRVGEDVTANLRTIADIPHRLKGSGWPDVIEVRGEVYVELAAFAAFNKAAEEAGQRT 207
           RGDG  GE+VT N+RTI  IP +LKG   P V++VRGEV +    F   N+    A Q+ 
Sbjct: 151 RGDGTTGENVTENVRTIRSIPLKLKGKRVPHVLDVRGEVLMFKRDFERLNERQRAAEQKE 210

Query: 208 YANPRNFAAGSLRQIDPKISAQRPLRFFGYAWGLVSEGFA--DSQWGALERLAEWGFVTT 265
           +ANPRN AAGSLRQ+D KI+AQRPL FF Y  G++ EG     +    L+   E G    
Sbjct: 211 FANPRNAAAGSLRQLDSKITAQRPLSFFAYGIGVL-EGMEMPATHSELLDWYKELGLPVN 269

Query: 266 APPAQRVLNAQGLLDIYAQFEVLRPTLGFDIDGVVYKVDDLELQRRLGFVSRSPRWAIAR 325
           +  A  V  A+GLL  +      R  L +DIDGVVYKV+  + Q  LGFVSR+PR+A+A 
Sbjct: 270 SERAV-VQGAEGLLGFFHGVGEKREKLPYDIDGVVYKVNRRDEQDALGFVSRAPRFALAH 328

Query: 326 KFPAQRARTVLEAIDLQVGRTGAITPVARLKPVTVGGVSVTNATLHNGDEIARLDVRVGD 385
           KFPAQ A T L AID+QVGRTGAITPVARL+PV VGG +VTNATLHN DE+ R D+R+GD
Sbjct: 329 KFPAQEALTKLVAIDVQVGRTGAITPVARLEPVFVGGATVTNATLHNEDEVRRKDIRIGD 388

Query: 386 TVVIQRAGDVIPQIVEVALDARPDPAPPPYEFPHVCPCPLQTPLAREVTASGQESVVRRC 445
           TV+++RAGDVIP++V   LD RP  A    EF      P Q P+         +  + RC
Sbjct: 389 TVIVRRAGDVIPEVVSALLDRRPSDA---REF----VMPTQCPVCGSSIERLPDEAIARC 441

Query: 446 TGEFACPFQRVEHLRHFVSRRAFDIEGLGEKQLQAFFEEGWITEPADIFKLARDAEKLAV 505
           TG   CP QR + L HF  RRA DI+GLGEK +    E+  +  PAD+F +       A 
Sbjct: 442 TGGLFCPAQRKQALWHFAQRRALDIDGLGEKIIDQLVEQNLVRTPADLFNIG-----FAT 496

Query: 506 LREREGYGETSVANLVKGIEARRTIGMDRMIYGLGARDIGETTSTVLARNFDRFEDLQAA 565
           L E + + E S  NL+  +E  +   + R IY LG R +GE+T+  LA++F   + +  A
Sbjct: 497 LAELDRFAEKSAQNLLDSLEKAKHTTLARFIYALGIRHVGESTAKDLAKHFGSLDPIMDA 556

Query: 566 AEAA 569
           +  A
Sbjct: 557 SVEA 560



 Score =  109 bits (273), Expect = 4e-28
 Identities = 66/155 (42%), Positives = 88/155 (56%), Gaps = 15/155 (9%)

Query: 633 LAQRYGTWDAFADGLVAAASGAPGDDYLHLAAIDGVGPVAAQSLARFFAEDHNRQKVANL 692
           LA+ +G+ D   D  V A           L  ++ VGPV A+S+ +FFAE+HNR  +  L
Sbjct: 543 LAKHFGSLDPIMDASVEA-----------LLEVNDVGPVVAESIHQFFAEEHNRTVIEQL 591

Query: 693 VAELDIQ----PVAKPKTDTAVAGKTIVFTGSLEKMTRDEAKAQAEGLGAKVASSVSKKT 748
            A   +     P A       +AGKT+V TG+L  + R+EAK   E  GAKVA SVSKKT
Sbjct: 592 RAPGKVTWPEGPPAPKAPQGVLAGKTVVLTGTLPSLAREEAKEMLEAAGAKVAGSVSKKT 651

Query: 749 DLVVAGPGAGSKLKTATDLGIQVMTEDEWLELVAG 783
           D +VAG  AGSKL  A +LG+ V+ ED   +L+ G
Sbjct: 652 DYLVAGADAGSKLAKAEELGVPVLDEDGMRKLLEG 686