Pairwise Alignments

Query, 502 a.a., cell wall degradation protein from Caulobacter crescentus NA1000

Subject, 472 a.a., peptidoglycan binding domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  155 bits (391), Expect = 4e-42
 Identities = 105/331 (31%), Positives = 162/331 (48%), Gaps = 31/331 (9%)

Query: 185 AKGGWLPIAAGPELKEGVTGARVVALEARL--AAEDPTVAVDAAPVFDAALTQAVQRAQK 242
           A+  W PI     L+ G +   VVA+  RL    +  T    A   +D  + Q V+  Q 
Sbjct: 137 AEQPWQPIVLNGLLRPGDSHTEVVAIAKRLWLLGDMETEPGYALSRYDDEVAQGVKAFQH 196

Query: 243 RFGLNPNGIVDRATLAALNIPVERRI-----DQIVANMERWRWLPQTLPAERIQVNVAAA 297
           R GL  + ++   TL  LN+  + R      D ++ + ER     QTLP+  + VN+ A 
Sbjct: 197 RHGLKQDAVIGPKTLYWLNLAPDTRAARLARDYLLQSRER-----QTLPSTYVLVNIPAF 251

Query: 298 ILSVFHHDTPTLTMRAVTGRPGDETPMLSSMIHSIVLNPPWNVPQSIASKEIWPKERASP 357
            L +       +  R + G+P  +TP + S I ++V+NP W VP+ +   ++ PK R   
Sbjct: 252 DLELVDDGEALMHSRVIVGKPSRKTPFIQSEISAVVVNPSWRVPRRLMRLDVLPKVRKDG 311

Query: 358 GYLARNDFIVIPIEGGGTR-----------------LQQKAGPLAALGKVKFDFNNPYGV 400
            YL+R  FIV   EG   +                 L+Q+ GP  ALG+ K  F N   V
Sbjct: 312 SYLSRKGFIVWSREGEEVKETDDFFQSAAAGKFPYLLEQRPGPDNALGRFKLHFANEDNV 371

Query: 401 YLHDTPSRSRFDSFSRLASHGCVRLQKPIELVNEVMRDDPTWTPEKVNETLASGETVR-A 459
           YLHDTP +  FD   R  S GCVR++K  EL +  + +     P +  +TL + +T R  
Sbjct: 372 YLHDTPDKHLFDEPMRALSSGCVRVEKINEL-SAWLANGRLADPRRWQQTLQTPQTTRWF 430

Query: 460 KLPQQIAVYLLYWTAYVTPDGQVNFRQDPYG 490
            L +++ V+ +YWT++V  +G+  FR+D YG
Sbjct: 431 TLKERLPVHFVYWTSWVDAEGKAQFREDIYG 461